Pseudomonas xanthosomatis: KSS93_16900
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Entry
KSS93_16900 CDS
T07606
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxa03016
]
KSS93_16900
Enzymes [BR:
pxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KSS93_16900
Transfer RNA biogenesis [BR:
pxa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KSS93_16900
Prokaryotic type
KSS93_16900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QXH44563
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All DBs
Position
3787436..3788395
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AA seq
319 aa
AA seq
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MDLQFLGTSSGVPTKARNVSATAVIESAGHGWYLVDCGEGTQHQLLHSPLSVRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRSEPLTLVMPAALQAWIRQSLAVSETYLPFELQIQALE
SFSTMACGNVSVSTVELSHRVPSWAYVFSERDPEPRLDTARLKADGIPAGPLWGQLARGE
AVEHEGRPLDPQAYLQATRAPQRIIVCGDNDRPELLATVAQGVDVLVHEATFTQPVIARS
QSNFGHSTAAAVAQFAEAAQVRNLVLTHFSARYQAVPGRGNSIGEIRDEALAGYHGNLTL
ARDLQRYHLGRDGVLVEVV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcagtttctgggcacctcgtccggtgtgcccaccaaggcccgcaacgtcagc
gccaccgccgtcatcgaatccgccggccacggctggtacttggtcgattgcggcgagggc
acccagcaccagctgttgcacagcccgctatcggtgcgcgatctgcgcgccatcttcatc
acccacgttcacggcgaccactgcttcggcctgccggggctgctggccagcgccggcatg
tccgggcgcagcgagccgctgacgctggtcatgcccgccgccttgcaggcctggatacgg
caaagcctggcggtgagcgaaacctacctgccgttcgagctgcagatacaggcactggaa
agcttcagcaccatggcctgcggcaatgtcagcgtatcgaccgtggagctgtcgcaccgg
gtgccatcctgggcctatgtgttcagcgagcgtgaccccgaacctcggctggacaccgca
cgcctgaaggccgacggcatccccgccggaccgctgtggggccagctggcccgcggcgag
gcagtcgagcacgagggccgcccgctcgacccgcaggcctacctgcaagcaacccgtgcg
ccgcagcgcatcatcgtgtgtggcgacaacgaccgccccgagctgctggcaacggtggcc
cagggcgtggacgtgctggtgcacgaagccaccttcacacaacctgtgatcgcgcgcagc
cagagcaacttcggccacagcacagcagcggccgtggcgcagtttgccgaggcagcgcag
gtgcgcaacctggtgctcacccacttcagcgcgcgctaccaggccgtgcccgggcgcggt
aacagcatcggtgagatacgcgacgaggcgctggccgggtatcacggcaacctgaccctg
gcgcgtgacctgcagcgctatcacctggggcgtgacggggtgttggtggaagtggtctga
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