Pseudomonas xanthosomatis: KSS93_19780
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Entry
KSS93_19780 CDS
T07606
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00040
Pentose and glucuronate interconversions
pxa01100
Metabolic pathways
pxa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KSS93_19780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KSS93_19780
Enzymes [BR:
pxa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KSS93_19780
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GFIT
Motif
Pfam:
Pectate_lyase_4
Lectin_like
Motif
Other DBs
NCBI-ProteinID:
QXH45103
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Position
4492254..4493396
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AA seq
380 aa
AA seq
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MAKPSTFTPCKLASALVGALVLGSLPAHAADIWLDSATTGWATQNGGTKGGSKAAAANIY
TVKNAAELKTALSASVGSNGRIIKITGVIDISEGKAYTTTADMKKRGRLDIPGKTTIVGT
SSNAEIREGFFYAKENDVIIRNLTIENPWDPEPIWDANDGKEGNWNSEYDGLTIEGANNV
WVDHVTFTDGRRTDAQNGTANGRPKQHHDGALDVKNGANYVTISYTVFKSHEKNNLIGSS
DSRTTDDGKLKVTIHNSLFENISARAPRVRFGQVHLYNNYHVGSTSDKVYPFSYAHGVGK
SSKIFSENNAFEISGISSCDKIAGDYGGSVYRDSGSTLNGKTLSCSWNSSIGWTPPYTYK
PLTADKVAADVKAKAGAGKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccatcaaccttcaccccgtgcaaactggccagcgccctcgtcggcgccctt
gtgctgggcagcctgcctgcgcacgctgcggacatttggctggattcggccaccaccggc
tgggccactcagaacggcggcaccaagggtggctccaaggccgctgcggccaacatctac
acggtaaagaacgctgccgagttgaaaaccgcgctgagtgcatcggtgggcagcaacggg
cgcatcatcaagatcaccggggtgatcgacatcagtgaaggcaaggcttatacgacgact
gccgacatgaagaagcgtggccgcctggacattcccggcaaaaccaccatcgtcggcacc
agcagcaatgccgagatccgcgaaggtttcttctacgccaaagaaaacgacgtgatcatt
cgcaacctcaccatcgagaacccttgggacccggagccgatctgggatgccaatgatggc
aaggaaggtaactggaactccgaatacgatggtttgaccatcgagggcgccaacaacgtg
tgggttgaccatgtcaccttcaccgacggccgccgcaccgacgcgcagaacggcaccgcc
aacggccgtccgaaacagcaccacgacggcgcgctggacgtgaagaacggcgccaactac
gtgaccatttcgtacaccgtgttcaagtcccacgaaaagaacaacctgatcggttccagc
gacagccgcactaccgatgatggcaagctcaaggtgacgatccacaactccctgttcgag
aacatttcggcccgcgccccgcgcgtgcgcttcggccaggtgcacctgtacaacaactac
cacgtgggcagcaccagcgataaggtctaccccttctcgtacgcgcatggcgtcggcaag
agctcgaaaatcttctccgagaacaacgcgttcgagatcagcggcatcagcagctgcgac
aagatcgccggcgactacggtggcagcgtgtaccgcgacagcggctcgaccctcaacggc
aagacgctgagctgctcctggaactcgagcatcggctggaccccgccttacacctacaag
ccgctgaccgcagacaaggtcgccgcggacgtcaaggccaaggccggcgccggcaagctc
tga
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