Pseudomonas xanthosomatis: KSS93_20490
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Entry
KSS93_20490 CDS
T07606
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pxa01011
]
KSS93_20490
Enzymes [BR:
pxa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KSS93_20490
Peptidoglycan biosynthesis and degradation proteins [BR:
pxa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KSS93_20490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
QXH45233
LinkDB
All DBs
Position
4643852..4645285
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AA seq
477 aa
AA seq
DB search
MSSSSRRTSHSVALTRLAQISALALAATLVGCQSTRQLDESDSVRAHNYQARIKHKPAPL
VVKAKPQAQAPQDVWERMRQGFALQDGIDVNPRIEQQRLWFASNPSFVETAGERGSLYLH
YIVERLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTSFYDGR
RDVTASTNAALDYLNRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPL
PQETRDYVPKLLALSQVVNTPEAYGVNLNPIANEPYFEAVAINERLDLSRVAAFADIDED
ELIQLNPAFKKRMTVDGPKQLLVPTAKAQLLSDRMSNLKPEELISLQPNKAVFQAALAEA
KAPAARSYRVKRGDNLGSIAKANRVSVKQLQSWNGMRGNSLKVGQVLALRGGNAPSAAGN
RVADSKQRSTQYKVRKGDSYYLVAKRFNVEMKHLKRWNPRSGHALKPGQTLTVYLSH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagtagccgcagaacctctcattcggtcgccctgacgcgactggcacagatc
agtgcactggcgctggccgccacactggtgggctgccagagcacccgtcagctcgacgaa
tccgacagcgttcgcgcacacaactaccaggcgcggatcaagcacaaacccgcaccgctg
gtggtcaaggcaaagccccaggcccaggccccgcaagatgtgtgggagcgcatgcgccag
ggcttcgccctgcaggacggcatcgacgtcaacccgcgcatcgaacagcaacgcctgtgg
ttcgccagcaacccgtcgttcgtcgaaaccgccggcgagcgcggcagcctctacctgcac
tacatcgtcgaacgcctcgaagaacgcgacatgccgctggagctggcgctgctgccggcc
atcgaaagcgcctacaacccgatggcctactcacgggccagtgccgccggcatgtggcag
ttcatgccggccaccgggcgccacttcaacctgcgccaaaccagcttctacgatggccgc
cgcgacgtcaccgcctcgaccaacgccgcgctggactacctgaaccgcctgcacgacatg
ttcaacggcgactggctgctggccctggcggcctacaacgccggcgaaggcacggtcagc
cgcgccatcgaacgcaacgaaaaactcggcctgcccaccgactactggaacctgccgctg
ccacaggaaacccgtgactacgtgcccaagctgctggccctgtcgcaggtggtcaacacc
cccgaagcctacggcgtgaacctcaacccgatcgccaacgagccctacttcgaagccgtc
gccatcaacgagcgcctcgacctgtcgcgggtcgccgcctttgccgacatcgacgaagac
gaactcatccagctcaacccggcgttcaagaagcgcatgaccgtggacggccccaagcaa
ctgctggtgcccaccgccaaggcgcagctgctgtcggaccgcatgtccaacctcaagcct
gaagagctgatcagcctgcaaccgaacaaggccgtgttccaggccgccctggccgaagcc
aaggcgccggcggcgcgcagctaccgggtcaagcgtggcgacaacctgggcagcatcgcc
aaggccaaccgggtgtcggtcaagcagctgcaaagctggaacggcatgcgcggcaacagc
ctcaaggttggccaggtgctggccctgcgcggcggcaacgcacccagcgcggcaggcaac
cgggtggccgactcgaagcagcgttccacccagtacaaggtgcgcaagggcgactcgtac
tatctggttgcaaaacgtttcaacgtcgagatgaaacacctcaagcgctggaacccgcgc
agcgggcatgccctcaagcccgggcagacgctgaccgtttacctatcgcactga
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