Pseudomonas xanthosomatis: KSS93_22360
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Entry
KSS93_22360 CDS
T07606
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxa03009
]
KSS93_22360
Enzymes [BR:
pxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSS93_22360
Ribosome biogenesis [BR:
pxa03009
]
Prokaryotic type
rRNA helicases
KSS93_22360
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXH45592
LinkDB
All DBs
Position
complement(5071586..5072947)
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AA seq
453 aa
AA seq
DB search
MQLEFLHLPEVTPVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPMLNRLVDRSGPSVEIRALILLPTRELAQQTLKQVKLFSQFTYIKSGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLVLDEADRMLDMGFAEDME
RLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQVITADHD
QHKEQIVQWLLANETYQKAIIFTNYRVLADRIYGHLVAKEVKAFVLHGDKDQKDRKLAID
RFKEGGSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRIGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYSGPKKVKASGKAVGSKKKKGDKKTGDKKT
AAKRKPTAKPRPNAPLASADGLAPLKKRKPAAE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgaatttttgcacttgcccgaggttacccccgtgttttcccaattcgccctg
cacgaacgcctgctcaaagccgtggccgagctgaaatttgtcgagccgaccccggtgcag
gcagcggccattcccctggccctgcaagggcgtgacctgcgggtgacggcacagaccggc
agcggcaagaccgcggccttcgtgctgccgatgctcaaccgcctggtcgaccgcagtggc
ccgagcgtggaaatccgtgcactgatcctgctgccgacccgcgagctggcccagcagacc
ctcaagcaggtgaagctgttctcgcagttcacctacatcaagtcgggcctggttaccggc
ggtgaggacttcaaggaacaagcggcaatgctgcgcaaggtgccagacgtgctgatcggc
accccgggccgcctgctcgagcagctcaacgccggcaacctcgacctgtcccacgtgcag
gtactggtgctcgatgaagccgaccgcatgctcgacatgggctttgccgaagacatggag
cgcctgtgcaaggagtgcgagaaccgcgagcagaccctgctgttctcggccaccaccggt
ggcgcggcgctgcgcgacatcatcggcaaggtactcaaagaccctgagcacctgatgctc
aacagcgtttcgcaactggccgagggcactcgccagcaggtcatcaccgccgaccacgat
cagcacaaagaacagatcgtccagtggctgttggccaacgagacctaccagaaggcgatc
atcttcaccaactaccgtgtcctggccgaccgtatctacggccacctggtggccaaggaa
gtgaaggccttcgtgttgcacggcgacaaggaccagaaggaccgcaagctggccatcgac
cgcttcaaggaaggcggctcgaaggtgctggtagccaccgacgtcgccgcccgcggcctg
gacatcgacggcctggacctggtgatcaacttcgacatgccgcgcagcggtgacgagtac
gtgcaccgtatcggccgcactggccgtgccggtggcgagggcctggccatctcgctgatc
acccacaacgactggaacctgatgtccagcatcgagcgctacctcaagcagcagttcgag
cgccgggtcatcaaggaagtcaaaggcacctacagcgggccgaaaaaggtcaaggcctcg
ggcaaggctgttggtagcaagaagaaaaagggcgacaagaagaccggcgacaagaaaacc
gcagccaagcgcaagccaacggccaagccgcggcctaacgccccgctggccagcgccgat
ggcttggcaccgctgaaaaagcgcaagccagcggctgagtaa
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