Pseudomonas xanthosomatis: KSS93_22475
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Entry
KSS93_22475 CDS
T07606
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa00061
Fatty acid biosynthesis
pxa00071
Fatty acid degradation
pxa01100
Metabolic pathways
pxa01212
Fatty acid metabolism
pxa02024
Quorum sensing
pxa04146
Peroxisome
Module
pxa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KSS93_22475 (fadD1)
00071 Fatty acid degradation
KSS93_22475 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KSS93_22475 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KSS93_22475 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pxa01004
]
KSS93_22475 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxa04147
]
KSS93_22475 (fadD1)
Enzymes [BR:
pxa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KSS93_22475 (fadD1)
Lipid biosynthesis proteins [BR:
pxa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KSS93_22475 (fadD1)
Exosome [BR:
pxa04147
]
Exosomal proteins
Exosomal proteins of breast milk
KSS93_22475 (fadD1)
Exosomal proteins of breast cancer cells
KSS93_22475 (fadD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
QXH45613
LinkDB
All DBs
Position
complement(5103500..5105197)
Genome browser
AA seq
565 aa
AA seq
DB search
MIEHFWKDKYPAGITADINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYTLSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTTREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPNAVRFNDALALGKGGAVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRSLDFSSLKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPAEANQVGTIGIPVPSTLCKVIDDNGQELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSNGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTLTKEQVMEHMRANVTGYKVPKAIEFRDSLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacatttttggaaggataagtacccagccgggatcacggcggacatcaatcct
gacgaattccccaatatccaggccgtactcaagcaatcctgccaacgttttgccgacaaa
cctgcctttagcaacctgggcaagaccatcacctatggcgagctgtacacgctgtccggc
gccttcgccgcctggctgcagcagcacaccgacctcaagcctggcgatcgcatcgccgtg
caactgcccaacgtcctgcaatacccagtagccgtgttcggtgccatgcgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccacgcgggaaatggaacaccagttcaacgac
tctggcgccaaggcgctggtgtgcctggccaacatggcccacctggcagaaaaggtagta
cccaagacccaggtcaagcacgtcattgtcaccgaagtggccgacctgctgccaccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaaaaaaatggtgccggcctacaac
ctgcccaacgccgtgcgcttcaacgatgcgctggccctgggcaagggcggggcggtcacc
gaggccaacccgcaggccaacgacgtggcggtgctgcagtacaccggcggcaccaccggg
gtggccaagggcgccatgctcacccaccgcaacttggtggccaacatgctgcagtgccgc
gcgctgatgggctcgaacctgcacgaaggctgcgagatcctgatcaccccgctgccgctg
taccacatctatgcctttaccttccattgcatggccatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgcgacctgccggccatggtcaaggaactgggcaagtggaag
ttcagcggcttcgtcggcctgaataccttgttcgttgccctgtgcaacaacgaggcgttc
cgcagcctggacttctcctcgctgaaaatcacgctgtccggcggcatggccctgcaactg
agcgtggccgagcgctggaaggcggtcaccggctgcgccatctgtgaaggctacggcatg
accgagaccagcccggtggcggcggtcaacccggccgaggccaaccaggtcggcaccatc
ggtattccggtgccctcgacgctgtgcaaggtcatcgatgacaacggccaggaactgccc
ctgggcgaagtcggcgagctgtgcgtgaagggcccgcaggtaatgaagggctactggcag
cgtgaagacgccaccgccgagattctcgacagcaatggctggctgaagaccggcgatatc
gcgctgatccagccggacggctatatgcgcatcgtcgaccgcaagaaggacatgatcctg
gtgtcgggcttcaacgtgtacccgaacgagctcgaagacgtgctcgccgcgctgcccggc
gtgctgcagtgcgccgccatcggcgtaccggatgaaaagtccggcgaggtgatcaaggtg
ttcatcgtggtcaagccgggcatgaccctgaccaaagagcaggtgatggagcacatgcgt
gccaacgttaccggctacaaggtgcccaaggccatcgagttccgcgattcgctgccgacc
accaacgtcggcaagatcctgcgccgcgagctgcgtgacgaagagctgaagaagcagggc
ctgaagaagatcgcctga
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