Pseudomonas xanthosomatis: KSS93_23150
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Entry
KSS93_23150 CDS
T07606
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxa03009
]
KSS93_23150 (rimO)
Enzymes [BR:
pxa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KSS93_23150 (rimO)
Ribosome biogenesis [BR:
pxa03009
]
Prokaryotic type
ribosomal protein modification factors
KSS93_23150 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QXH45739
LinkDB
All DBs
Position
5252627..5253958
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AA seq
443 aa
AA seq
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MSTTNAIPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLSVSGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLDEVPDDIKQD
RWDRFMAHQQAISAARLQLRIGKEIEVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccaacgccatccccaaggtcggcttcgtttcgctgggttgccccaaggcc
ctggtcgattccgagcgcatccttacccagctgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgctggaagtcatcggcgaggcgatcaaggaaaacggcaaggtcatcgtgacc
ggctgcatgggcgtcgaagaaggcaacatccgtgacgtgcacccaagcgtgctgtcggtg
agtggcccgcagcagtacgagcaagtggtcaacgccgtgcacgaagtggtgccgccgcgc
caggaccacaacccgctgatcgacctggtgccgccacagggcgtcaagctgaccccgcgc
cactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaagctggtcagccgcccggtgggtgaagtgctgagcgaggccgag
cgcctggtcaaggccggcgtcaaggagatcctggtgatctcccaggacaccagcgcctac
ggcgtggacgtaaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaggccctgagcagcctgggcgcctgggtacgcctgcactacgtgtac
ccgtacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggacatcccgttccagcacgccagccccaaagtgctcaagtcgatgaagcgcccggcc
ttcgaagaccgcaccctggcgcgcatcaagaactggcgcgagcagtgccctgagctggtg
atccgctccaccttcatcgtcggcttcccgggtgaaaccgaagaagacttccagtacctg
ctggactggctgaccgaagcccagctcgaccgcgtgggttgcttccagtactcgccggtc
gaaggcgccccggccaacgacctgggcctggacgaagtaccggacgacatcaagcaggac
cgctgggaccgcttcatggcccaccagcaggcgatcagcgccgcacgcctgcaactgcgc
atcggcaaggaaatcgaagtgctgatcgacgaagtcgaggagcaaggctcggttggccgc
agcttcttcgatgccccggaaatcgacggcagcgtgttcattgatggcgaccatggcttc
aagccgggcgacaaggtccgttgccgcgtggtcgatgccgacgagtacgacatgtgggcc
gagccggtctga
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