Pseudomonas xanthosomatis: KSS93_23370
Help
Entry
KSS93_23370 CDS
T07606
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxa03016
]
KSS93_23370 (truD)
Enzymes [BR:
pxa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KSS93_23370 (truD)
Transfer RNA biogenesis [BR:
pxa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSS93_23370 (truD)
Prokaryotic type
KSS93_23370 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXH45778
LinkDB
All DBs
Position
complement(5288242..5289300)
Genome browser
AA seq
352 aa
AA seq
DB search
MTELELLGPRASGEALGSAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRAISYAGLKDRQALTRQWFSLHLPGKADPDLTRAEDDTLRVLKQVRHSR
KLQRGAHSANGFTLRLTGLTAEHAALDARLEQLKAQGVPNYFGAQRFGHAGGNVHDAQDW
AARQALPEQRNVRSRLLSAARSYLFNQVLAARVVDGSWQQAQVGDLLAFTDSRSFFAAGE
AECSDPRLGILDLHPTGPLWGEGEAPGSGSPQALENTVGARHPQLCQWLARAGMAHERRI
LRLPIGRLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctggggccacgggcctcgggcgaagccctgggcagcgccgta
ttgaaggccgtggccgaggacttccaggttgatgaagtgctcgatatcccgttgtcgggg
cagggcgagcacctgtggttgtgggtcgaaaaacgcgacctcaataccgaagaggcggcc
cgccgcctggcccgcgccgccggcgtgccggtacgcgccatcagctatgcgggcctgaag
gaccgtcaggccctgacccgccagtggttcagcctgcacctgccgggcaaggccgaccct
gacctgacccgcgccgaagacgacaccttgcgcgtgctcaagcaggtgcgccattcgcgc
aagctgcaacgcggtgcccattcggccaacggcttcaccctgcgtctgaccggtctgacc
gccgagcacgcggccctcgatgcgcgcctggagcaactcaaggcccagggcgtgcccaac
tatttcggtgcacagcgttttggccatgccggcggcaacgtacacgacgcccaggactgg
gcggcgcgccaggccctgcccgagcagcgcaatgtgcgttcgcgcttgctgtcggccgcg
cgcagttacctgttcaaccaggtgctggccgcacgggtggtcgatggcagctggcagcaa
gcacaggtgggcgacctgttggccttcaccgacagccgcagcttcttcgccgcaggcgag
gccgaatgcagcgacccgcgcctggggattcttgacttgcaccccaccggcccgttgtgg
ggcgagggcgaggcgccaggcagcggcagccctcaggcgttggaaaacactgtcggcgcg
cgccacccgcagctgtgccagtggctggcgcgggcgggcatggcgcacgaacggcgcatt
ctgcggctccctattgggcggcttacatggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaactcgtcgatctg
gtgccggcagggcagacggacagcccatgcgtattctga
DBGET
integrated database retrieval system
