Pseudomonas xanthosomatis: KSS93_23935
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Entry
KSS93_23935 CDS
T07606
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxa03036
]
KSS93_23935 (xerD)
Chromosome and associated proteins [BR:
pxa03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
KSS93_23935 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QXH45882
LinkDB
All DBs
Position
complement(5411863..5412759)
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AA seq
298 aa
AA seq
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MPALDHPLIDQFLDALWLEKGLSDNTRASYRSDLALFNGWLQEKGVALPDAGRELILDHL
AWRFDQAYKPRSTARFLSGVRGFYRYLLRERMIGVDPTLQVDMPQLGRPLPKSLSEADVE
ALLQAPDRSEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLV
PMGEEAVVWIERYVRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctcgaccaccccctgatcgaccagttcctcgacgccctgtggctggaaaaa
ggcctgtccgacaacacccgcgcctcttaccgcagcgacctggccctgttcaacggctgg
ctgcaggaaaaaggcgtcgcgttgcccgatgccggccgcgagttgatcctcgaccacctg
gcctggcgcttcgaccaggcgtacaagccgcgctcaacggcgcgctttctgtccggcgtg
cgtggtttttaccgctacctgctgcgcgaacgcatgatcggcgtagacccgacgctgcag
gtagacatgccgcaactgggccgcccgctacccaagtcgctgtccgaagccgatgtagag
gccctgttgcaggcgccggaccgcagcgaagccatcggccagcgcgaccgcgccatgctc
gaggtgctgtatgcctgtggcctgcgggtcaccgagctggtcagcctgaccctcgaccag
gtcaacctgcgccagggcgtgctgcgggtgatgggcaagggcagcaaggagcgcctggtg
cccatgggcgaggaggcggtggtgtggatcgagcgttatgtgcgcgacggccgcgccgag
ctgctcaatggccgccccagcgacgtgctgttccccagccagcgtggcgaacagatgacc
cgccagaccttctggcaccgcatcaagcatcatgcccgggtggccggtatcgacaagccg
ctgtcaccgcacaccctgcgccacgccttcgccacccacctgctcaaccacggcgccgac
ctgcgcgtggtgcagatgctgctgggccatagcgacctgtctaccacgcagatctacacc
cacgtagccaaggcccgcctgcagcagctgcacgcccagcaccatccgcgtggatga
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