Pseudomonas xanthosomatis: KSS93_25515
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Entry
KSS93_25515 CDS
T07606
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pxa
Pseudomonas xanthosomatis
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_25515 (phrB)
Enzymes [BR:
pxa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KSS93_25515 (phrB)
DNA repair and recombination proteins [BR:
pxa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KSS93_25515 (phrB)
Prokaryotic type
KSS93_25515 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXH46183
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All DBs
Position
5778308..5779750
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AA seq
480 aa
AA seq
DB search
MQLIWLRSDLRIDDNTALAAACQRGPTIALWVASPGQWQAHDDAACKVDFWLRNLRQLRE
GLQALNIPLLVRHTDTWADVPQTVLKVCRQHAIEAVHWNDEYGVNEAHRDQATRQRLQSE
GIAAHGHLDQLLFQPGTILTRAGHYFQVFSQFKRVCLEHLHRSLPARAAQVKAQAPLAID
SDPIPQHIEGFEGTPRALREHWPAGEDEAHQRLARFIDERVEDYPQQRDLPAKQGTSQLS
PYLAAGVISPRQCLHAALASNHGEFDSGNAGVQTWVNELLWREFYKHILVGYPQVSRHRA
FRAHTEHLPWRDAPGDLQAWKEGRTGFPIIDAAMRQLLHTGWMHNRLRMIVAMFLSKNLL
IDWREGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVTQSQRFDTKGVFIR
HWLSELQGLDEKTVHYPAKASDLFATDHYVRPIVDLDSSRQRALEAFKGLSGWQDHEGHA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacctgcgcatcgacgacaacaccgccctggcagcc
gcctgccagcgcgggccgaccatcgccttgtgggttgccagccccggccagtggcaggcc
catgacgatgccgcctgcaaggtggacttctggctgcgtaacctgcgccagctgcgtgaa
ggcctgcaggcgctgaacatcccgctgctggtgcgccacaccgatacctgggccgatgtg
ccgcaaaccgtgctcaaggtctgccgccagcatgccatcgaagcggtgcactggaacgac
gagtacggggtcaacgaggcccatcgcgatcaagccacccgccagcgcttgcaaagcgag
ggcatcgccgcccacggccacctcgaccagttgctgttccagcccggcaccatcctcacc
cgcgccggccattactttcaggtattcagccagttcaagcgggtgtgcctggagcacctg
caccgcagccttccggcccgcgccgcgcaggtgaaggcccaggccccgctggccatcgac
agcgacccgataccgcagcacatcgagggctttgaaggcaccccgcgagcactgcgcgaa
cactggccggccggcgaagacgaagcgcaccagcgcctggcccgctttatcgacgaacgc
gtggaggactacccgcaacagcgcgacctgccggccaagcaaggcaccagccagctgtcg
ccctatcttgccgccggggtgatctcgccgcgccagtgcctgcacgccgcccttgccagc
aaccacggcgagttcgacagcggcaacgccggggtgcagacctgggtcaacgagctgctt
tggcgcgagttctacaagcacattctggtgggttatccacaggtgtcccggcaccgcgcc
ttccgcgcccacaccgagcacctgccatggcgtgacgcgccaggtgacctgcaagcctgg
aaagaaggccgcaccggcttcccgatcatcgacgcggcgatgcgccagctgctgcacacc
ggctggatgcataaccgcctgcgcatgatcgtcgcgatgttcctcagcaagaacctgctg
atcgactggcgtgagggcgagcggcacttcatgcgccacctgatcgacggcgacctggct
gccaacaacggcggctggcaatggagcgcctccactggcactgatgcggtgccgtacttt
cgcatcttcaacccggtcacccagtcgcagcgtttcgatacgaaaggagtattcatccgc
cattggttgtcagagctgcagggcttggacgaaaagaccgtgcattacccggccaaagcg
tccgatttgtttgcaaccgaccattacgtccgcccgatcgtcgacctggacagcagccgc
cagcgggcactggaggccttcaagggcttgtccgggtggcaggatcacgaggggcatgct
tga
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