Pseudomonas xanthosomatis: KSS93_26145
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Entry
KSS93_26145 CDS
T07606
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pxa
Pseudomonas xanthosomatis
Pathway
pxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS93_26145 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxa03400
]
KSS93_26145 (recC)
Enzymes [BR:
pxa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS93_26145 (recC)
DNA repair and recombination proteins [BR:
pxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS93_26145 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QXH46303
LinkDB
All DBs
Position
complement(5921004..5924486)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAITTSLHPGFMIVQGNRLDELRNLVVSVMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPQDDDQGGCGIAAAIDVQLPGSFMWQLYRQVLGRDEIPQVSLLDKAPLTWRLMRLLPQV
IERPHFEPLRRFLTDDSDLRKRYQLSERLADLFDQYQVYRADWLKDWASGNHVLNTARGE
RKPLAAGNRWQAELWRILLEDVGEAGMAQSRAGVHQRFIEHINALEEAPNGLPARLIVFG
ISSLPAQVLEALAGLARFSQVLLCVHNPCRHHWGDIVADKDLLRHQYKRQQRKQGMPLQL
DDESLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDADPKTLLNQL
QDDILELRPLAETREQWPAVDPAKDRSVRFHVAHSPQREVEILHDQLLARFGADPTLRPR
DIIVMLPAIDAYAPHIRAVFGQLDRSDPRYIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFAIQESDLPTLHRWIEGAGIRWGLSAEQRATLGLPGGLEQNS
WRFGLRRMLLGYAVGVGEGCDGIEPYDEIGGLDAALIGPLVALLDALEVACQALTQPATA
TEWGERLHALLQVFFLAEHEHDELLLAQLQDLRDTWLETCESVALQDPLPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQQPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPSSVLIGQLRDHLAAGWQLAG
AKPGQKDDPGQQLLHALTQEHPLQPFSQRYFQKGSALFSFAHEWLALHQAGEGEQAEPQA
LPPFSSDEPLTLVQLQDFLRHPVRHFFSQRLKVFFEALEAPTPDEEPFVLDALQRYGLSE
SLLGAALAEPDNAEQALQRQARRLQACGLLPLAGFGEALQAELIQPLPDLLQRHRQLLQR
WPAVVEGALPIHFEHGPHALEGWLGRVYQAQDQSLLSINTVPNTLSAGRNALKWQRLIPA
WVMHLAACASGYPLHTALVASDLTLLLAPLAREEAAERLADLLVARQAAMNAPLPVAAKT
AFAWLAQSDPDKALAAATRAYEGDGQNSFGERSESLALARQYRDFAALAQDETFEGWCET
LYRPLFAAPWQTLGNPESAQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccataacgacctcactgcacccaggtttcatgatcgtccagggcaaccgcctggat
gagctgcgcaatctggtggtgagcgtcatgcgccgttacccgctggccccactggaaaac
gaaatcgccctggtgcaaagcaacggcattgcccagtggctgaagttggccctcgccgaa
gacccgcaggacgatgaccagggaggctgcggtatcgcagccgccatcgatgtgcaattg
cccggcagtttcatgtggcagctgtatcgccaggtattgggccgcgacgagatcccgcaa
gtgtcgctgctggacaaggcccccttgacctggcgcctgatgcgtctgcttccccaggtc
atcgagcgtccgcacttcgaaccgctgcgccgcttcctcaccgacgacagcgacctgcgc
aagcgctaccagctgtccgagcgcctggcagatctcttcgaccaataccaggtgtaccgc
gccgactggctcaaggactgggccagcggcaaccacgttctcaacaccgcacgcggcgag
cgcaagcccctggcggccggcaaccgctggcaggccgagctgtggcgcatcctgcttgaa
gatgtaggcgaagccggcatggcccagagccgtgccggcgtgcaccagcgcttcatcgag
cacatcaacgccctggaagaagctcccaatggcctgcccgcccgcctgatcgtgttcggt
atctcttcgctgcccgcccaggtgctcgaagccctggcgggccttgccaggttcagccag
gtgctgttgtgcgtgcacaacccctgccgccaccactggggcgacatcgttgccgacaag
gacctgctgcgccaccagtacaagcgccagcaacgcaagcaaggcatgccgctgcagctg
gacgacgagtcgctgcaccagcacgcccacccgctgctcgccgcctggggcaagcaaggc
cgcgactacatcaacctgctcgacagctacgacgaccctggcagctaccaaggggtattc
agcgacggccgcatcgacctgttcagcgacgccgaccccaagaccctgctcaaccagcta
caggacgacattctcgaactgcgcccgctggccgaaacccgtgagcagtggcccgcagtc
gaccccgcaaaggatcgctcggtgcgcttccatgtagcgcacagcccgcagcgtgaagta
gagatcctccacgaccagttgctcgcccgcttcggtgccgaccccacgctgcgcccacgg
gacatcatcgtcatgcttccggccatcgatgcctatgcgccgcacatccgtgcggtattc
ggccagctggatcgaagcgacccgcgctacatcccgttcaccctcaccgaccagggccag
cgcggccgcgacccgctactgatcgccctcgaacacctgctcaaattgcccgacagccgc
tttgccgtcagtgaagtgctcgacctgctcgacgtacctgccgtgcgcgctcgcttcgcc
atccaggaaagcgacctgcccactctgcatcgctggatcgagggcgccggcattcgctgg
ggcctcagcgccgagcagcgtgcgaccctcggcctgcctggaggccttgagcagaacagc
tggcgtttcggcctgcggcgcatgctgctgggctatgccgtgggtgtgggcgaaggttgc
gacggtatcgaaccctacgacgagatcggcggcctcgacgccgccctgataggcccgctg
gtggccctgctcgacgccctcgaagtcgcctgccaggccctgacccagccagccaccgca
accgagtggggcgagcgtctgcacgccctgttgcaggtgttcttcctcgccgaacacgag
cacgacgaactgctgctggcccagctccaggatttgcgcgacacctggctcgagacctgc
gagtcggtcgccctgcaagacccgctgccgctcacagtggtgcgcgaagcctggctgtcg
ggccttgaccaaggcaagttgtcccagcgctttctcgcaggctccgtgaacttctgcacc
ctgatgcccatgcgcgccatcccgttccgcgtggtctgcctgctgggcatgaacgacggc
gactacccgcgcgcccagcaaccgctggacttcgacctgatggccagcgactaccgcccc
ggcgaccgttcgcgacgcgaggacgaccgctacctgctgctcgaagccctgctgtccgcc
cgcgaccagctttacgtcagctgggtgggccgcagcatccgcgacaacagcgagcgcccg
tcctcggtactgatcggccagttgcgcgaccacctcgccgccggttggcaactggccggc
gccaagcccgggcagaaggacgaccccggccagcaactgctgcacgccctgacccaggaa
cacccgctgcaacccttcagccagcgctacttccagaagggcagtgcgctgttcagcttc
gcccacgagtggctggccctgcaccaggccggtgaaggcgagcaggcagaaccccaagcc
ctgccaccgttcagcagcgatgaaccactgaccctggtgcaattgcaggatttcctgcgt
cacccggtgcggcacttcttcagccagcgcctgaaggtattcttcgaagccctggaagca
cccacccccgacgaagaacccttcgtcctcgacgccctgcaacgctatggcctgagcgaa
agcctgctcggcgccgcgctggccgagcccgacaacgccgaacaagccctgcagcgccag
gcccggcgcctgcaagcctgcggcctgttgcccctggccggtttcggcgaagccctgcag
gccgagctgatccagccactgcccgacctgctgcaacgccaccgccagttgctgcaacgt
tggccggccgtggtcgaaggcgccttgccgatccacttcgagcacggcccgcacgcgctg
gaaggctggctcggccgcgtctaccaggcacaagaccaaagcctgctgagcatcaacacc
gtccccaacacccttagcgccgggcgcaatgccctcaagtggcaacgcctgatcccggcc
tgggtgatgcacctggccgcctgtgccagcggctacccgctgcacaccgcgctggtggcc
agcgacctcaccctgttgctggcccccctggccagggaagaggccgccgagcgcctcgcc
gacctgctggtagcccgccaggctgcgatgaacgcaccgctgccggtggccgccaaaact
gccttcgcctggctggcccagagcgacccggacaaggccctggccgcagcaacccgcgcc
tatgaaggcgacggccagaacagcttcggcgagcgcagcgaaagcctggccctggcccgc
cagtaccgcgacttcgccgccctggcccaggacgaaaccttcgaaggctggtgcgaaacc
ctgtaccgccccctgttcgctgccccctggcagaccctcggcaacccggagagcgcccaa
tga
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