Pyrus x bretschneideri (Chinese white pear): 103926561
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Entry
103926561 CDS
T03446
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103926561
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pxb01002
]
103926561
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103926561
03036 Chromosome and associated proteins [BR:
pxb03036
]
103926561
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103926561
Peptidases and inhibitors [BR:
pxb01002
]
Metallo peptidases
Family M67
103926561
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103926561
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
103926561
BRISC complex
103926561
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
103926561
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
103926561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Rab_bind
UPF0172
Motif
Other DBs
NCBI-GeneID:
103926561
NCBI-ProteinID:
XP_009333637
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSLTSVKMSEDVWLTCLTHALSTETEEIMGLLLGDIENSVNGGVTALIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTLSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQHHMSRPISLSPVHKSPVIDVESSLSTS
ENAPARSTLTRAGSPEQDTADSRTSGTIKGGGRSSDLGLFFANADASHLGRVGGNYQTDT
SSNIIGDIDPMDMSESMQEAMHRSNLDMSGAEYARKEVPLHVLPTSSLVKLNSPLMSFTE
LQRVLYEEERAAYNQAILQNMRDGKVHPLTFIHHTSMYQSSMCKLIEYCLSPAISALQCR
LRENETRLAVLTDQVKILETETHRIAETNSGSPRPVSSPVLRGSAPFGHREMFSPAESVT
ARSPAGSGSRSRKGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacgtctgtgaaaatgtcggaggacgtctggctgacgtgcctcactcacgca
ttgtccaccgagacggaggagatcatgggcctcctgcttggtgacatcgagaactctgta
aatggcggtgtgacagcactaatttggggagcatcacctcagacacgatctgatcggagg
aaggatcgtgtggagactaatcctgagcagttggctgctgcatcagcccaggccgaaaga
atgacactgtcaactggaagaacaactagagtgattgggtggtaccattcacatcctcat
attacagttcttccatctcatgttgacgtgcggacgcaggcaatgtatcaacttctagat
tctgggtttatcgggctcatattttcctgctttagtgaagatataaacaaggttgggcga
atccaagtcattgcttttcagtcctcggatgggaaacagcatcacatgtcaagacctata
tctttatctcctgtacataaaagtccagttatagatgttgaatcgtctttaagtacctca
gaaaatgcaccagcgagatccaccttaactagagcagggagtcctgaacaagacacagct
gattcaagaacttctggaactataaagggtggggggaggtcttcagacctggggcttttc
tttgccaatgctgatgcaagtcatctaggaagagttggaggaaactaccagactgacact
tcaagcaacatcattggcgatatagatcccatggatatgtcagagagtatgcaagaagca
atgcaccgttctaacttggatatgagtggtgctgagtatgccaggaaagaagttcctctt
cacgttttaccgacctcatctctcgtgaagctcaattcacctttaatgtcattcaccgaa
ttgcaacgagtactgtatgaagaggagcgagcggcttataaccaagcaatcttgcaaaat
atgagggatgggaaagtgcatcctcttactttcatacatcacacatcaatgtaccagtct
tccatgtgcaaattaatcgaatattgtttgagtcctgccataagtgcactgcaatgtcgg
ttaagagagaatgaaactcggttagcagtgctcaccgatcaagtgaagattttggaaact
gagacgcatagaatagctgagacaaattcgggatctcctcgtccagtttcatctcctgta
ctccgtgggagtgctccgtttggtcacagggaaatgtttagtccagctgaatctgtcact
gcaaggagtccagctggttctggcagtaggagccgaaaaggttcgtaa
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