KEGG   Pyrus x bretschneideri (Chinese white pear): 103926958
Entry
103926958         CDS       T03446                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103926958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103926958
   03036 Chromosome and associated proteins [BR:pxb03036]
    103926958
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103926958
Chromosome and associated proteins [BR:pxb03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     103926958
    COMPASS/SET1 complex (yeast)
     103926958
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_SCAP WD_LRWD1 DUF2963
Other DBs
NCBI-GeneID: 103926958
NCBI-ProteinID: XP_009334118
LinkDB
Position
Unknown
AA seq 338 aa
MKTSMTELDDETVRSMAIGAVFSDFGGKINSLDFHRKDDLLVTASEDDSVRLYDIATAKL
IKTTFHKKHGADRICFTHHPSSVICSSKHNLDTTGESLRYLSMYDNRCLRYFKGHKERIV
SLCMSPVNDSFMSGSLDHTVRIWDLRVNACQGILHMRGRPTVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGY
SVEPSPNVIIEATFTPDGQYVVSGSGDGNLHAWSINNRNEVACWDSHIGVPSCLKWAPRR
AMFAAASSVLTFWIPNEANEPTHMETEAGAADPEHPSQ
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaagacgtcgatgacagagctcgacgacgaaacggtgcgcagcatggccattggcgcc
gttttctcggacttcggtgggaagataaattcgcttgattttcatcgaaaggacgattta
ctagttactgctagcgaggatgattctgttcgactctatgacattgcaactgctaagttg
ataaagactacatttcataagaaacatggtgcagatcgtatatgctttacccatcaccca
agttctgttatatgctcttcaaaacacaatctggataccaccggagaatcgctgcggtat
ctgtcgatgtatgataatcgatgccttcgctatttcaaaggacataaagagaggattgtc
tccctctgtatgtctccggtgaatgatagcttcatgtctggttcattggaccacaccgtc
agaatatgggatctccgtgtaaatgcctgccagggaattttacatatgcgtggtagacct
acagttgcctatgatcagcaaggtcttgtttttgccgtggcaatggaagggggtgcgatt
aaattgtttgactcacgctcctatgacaagggtccatttgacacctttttagttggtgga
gatactgctgaagtttgtgatatcaaatttagcaacgatggcaaatcaatgttattgaca
accacaaacaacaatatctatgttcttgatgcatatggaggggagaagcgttgtgggtac
agtgtggaaccctctccaaatgtaattatcgaggcaacttttaccccagatggccagtat
gtggtgtcaggctctggagatggaaatttgcacgcctggagcatcaacaaccgaaacgag
gtggcatgctgggacagtcacatcggagttccgtcatgcttgaagtgggctcctcgcaga
gccatgtttgccgccgcatcaagcgttctcacgttttggatacctaatgaagcaaacgag
cctactcacatggagaccgaagctggtgctgccgatcccgagcatccttcccagtga

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