Pyrus x bretschneideri (Chinese white pear): 103927842
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Entry
103927842 CDS
T03446
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxb03016
]
103927842
Transfer RNA biogenesis [BR:
pxb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103927842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
RRM_1
MTS
Methyltransf_15
Methyltransf_4
Ubie_methyltran
Methyltransf_11
PCMT
PrmA
Methyltransf_32
Methyltransf_12
AviRa
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
103927842
NCBI-ProteinID:
XP_009335076
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSSTPTPTPTAEPSVTELLNPPSPLNGHGSTDQPQPPQDPATQPPDDVVSGDKRKREVND
DVQNPSAAPPLWKTSLCSFFRREAKTCGHGSECRYAHGEAELRPRPDNTWDPTSERAKKQ
KLEEEIEECVALDNVMMTEAIDEDGDGGDAGGLDPELSKCLVHLPRNWKSEKLKEFLSEK
GVGFKSAKKKKGMALGFVSFENAEQLQNAVKDLEGISIGNKVMKVADVIPRSFEKRTKSI
MAPQIPGVGLDGENVEDSMTANGAEDGDGLTGRSARKVVTPLAHMSYDDQLEHKKSSLMQ
ILKRLTRNARKACPDGIPLPEWILKSREIGGHPCSLEGILASPVVKGYRNKCEFSVGYSL
QGKITVGFMLGNFREGVTAVEEPFDCPNVSRISSQYASIFQEFLQHSSLPIWNRFKNVGF
WRQLTVREGRRPGIATDSEHCEANIAEVMLIVQVSSSGFDDAQITSEYERLAQAFAAGAA
ASSPSLPLTFLVIQDHQGISNAAPADAPLRSLSIPKAEGGSETQSADNVVEPKIHDYINN
LKFCISPTAFFQVNTPAAEKLYSLAGDWAQLGPDTLLFDVCCGTGTIGLTLAHHVGMVVG
IEMNASAVSDARRNAEINDIENCRFVCAKAEDVMRSLLEEYTIAPQKQDDHVTEGSDKVI
VTEGEKAISMDNKPNPEESSSRELDTASEGLEIDKQEVRSQPQSSCTSEKGKTPVKCFSN
VVAIVDPPRNGLHPTVIKALRTHADLRKLVYISCNPETLVANAIELCTPSPEKIDKNKNN
RAWRNMGSAGLARHRTKSMPASEPFRPVKAMAVDIFPHTVHCELVMLLER
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaactccaactccaactccaactgccgaaccgtccgtaactgaactcctaaac
ccaccatccccactcaacgggcacggttcaaccgatcaaccccaaccaccacaggaccca
gcaacccaaccgcctgacgacgtcgtatccggcgacaaacgcaagcgagaggttaacgac
gacgtccaaaacccttccgccgcgccccctctatggaagaccagcctctgctcctttttc
aggcgcgaggccaaaacctgcggccacggaagcgagtgccgctacgcacatggcgaggcg
gagctccgtccccgacccgacaacacgtgggacccgacatccgagcgcgccaagaagcag
aagttggaggaggagattgaggagtgcgtggctttggacaatgtgatgatgacggaggcc
atcgatgaagacggagacggcggcgatgctgggggtttggatcccgagctgagcaagtgc
ctggtgcatttgccgaggaattggaagtccgagaaactgaaagaatttctcagtgagaag
ggagtcggatttaagtcggcgaagaagaagaaaggcatggctttaggttttgtgagtttt
gagaatgcagagcaactacaaaatgctgtgaaggacctggaaggaatatcgattggcaac
aaagttatgaaggttgcggatgtcattcccagatcattcgaaaagagaacgaaatcgata
atggcacctcaaatcccaggtgttggattagatggggagaatgtggaagactctatgact
gcaaatggggctgaggatggtgatgggcttactggacgaagtgcccggaaagtcgtgact
cccctagctcatatgtcttatgatgatcagttggagcataaaaagagctctcttatgcag
attctcaaaagacttacgaggaacgctcgtaaagcttgtcctgatggtattccacttcca
gaatggatactcaagtctagggagataggtggccatccatgcagtttagagggtatacta
gcgtccccagttgtaaaaggatatcggaacaagtgtgaattttcagttgggtattcttta
cagggaaaaattactgtggggtttatgcttggaaactttagggagggtgttacagcagtt
gaagaaccttttgactgcccaaatgtttccagaatttcttcccaatatgcttcaatattt
caggaatttctgcaacattcaagtttaccgatttggaacagatttaagaatgttggattc
tggcgccaattgacggttcgagaagggaggagaccaggcattgctactgattctgaacat
tgtgaggctaatattgcagaggtcatgcttattgttcaggtttccagtagcggatttgat
gatgcgcaaataaccagtgaatatgagaggttggctcaagcttttgctgcaggagctgct
gctagctctccatctttgccactaacgtttttagttattcaggatcaccaaggaatatcg
aatgcagctcctgctgatgctccactgcgctcattatctattcctaaagcagaaggtggt
tccgaaacgcagtccgccgacaatgttgtagaaccaaaaattcatgactatataaacaat
cttaagttctgtatatcaccaacagcctttttccaggttaatacccctgctgcagagaag
ctttactcgcttgcgggggattgggctcagttgggtcctgataccttgctatttgatgta
tgttgtgggactggaacaattgggctgactttagcacaccatgttggtatggttgttggc
attgaaatgaatgcttctgcggtttcagatgctcgtaggaatgctgaaattaatgacata
gagaactgtagatttgtctgtgcgaaggcagaggatgtgatgcggtctttgttggaagag
tacacaattgcacctcagaaacaagacgatcatgtcactgaaggtagtgacaaagttata
gttaccgagggcgagaaagcaatctcaatggacaacaaacccaaccctgaggagagttca
agccgtgagcttgacactgcatctgagggtttagaaattgacaagcaggaagtgagaagc
caacctcaaagcagttgcacttctgaaaaggggaaaactccagtcaaatgtttcagtaat
gttgttgctattgttgatcctccacgaaacggacttcaccccactgtgatcaaagcgctg
aggactcatgctgatctacggaagcttgtctacatttcctgcaatcctgaaacgttggtg
gcaaatgcgatcgagctttgcacaccttctcctgagaaaatcgacaagaacaagaacaac
agagcatggagaaacatgggcagtgctggcctagcacggcacagaaccaagtctatgcct
gcttcagagcctttccgtcctgtgaaagcaatggctgttgacattttcccacataccgta
cactgtgaattagtaatgctccttgagaggtag
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