Pyrus x bretschneideri (Chinese white pear): 103927985
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Entry
103927985 CDS
T03446
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103927985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103927985
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
103927985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103927985
NCBI-ProteinID:
XP_009335251
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MDTNSSGEDLFIKARKPYTITKQRERWTEEEHNRFLDALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAHNKGVPMGQSIDIDIPPPRPKRKPSNPYPRKSSSAATTLTTPHV
GAKDGKLLSTASSSHCPQVVDLEKEPPHERPTEEENPKNGKENQDENCSEAFTLLQEHNC
SSDSTANKNSIPTQVVLRNACTFQEFVPSLKEVISQDVTTESYVTIELNGNQNMKKNDAK
KIVQVNGTSGASVSENTNALHKKLVQGEKADDLNCALPTDGMQGTQNYPRNVPVHVLDGS
VGACNQTTPADMSFPDSGFHPMGKVHGQPNLFANPAASTTTEHESNASRSTIHQSFPAFH
PPFTPFHHGQKDYQSFHHMSSTFSSLIVSSLLQNPAAHAAASFAATFWPYANVENTEDSP
ACSSAGGFPPTSPPSMAAIAAAXXXXXXXFAPATVAAATAWWAAHGLLPLCAPVQTSLSC
PPMPMTGGVPSVNTDQDPAVMTERGENSLQIPSAEDQQLEPEHLEAVDAQHLASQSPNRS
SSHSDNGGAEPNTELKSADDEKAVASTAQVNDSDNAKSRKQVDHSSCGSNTPSGSEVETD
ALEKHEKGTEEPEEPKEPKELDLNLLASDSNYRRSRSISNMNDPWKEVSEEGRMAFQALF
AREVLPQSFSPPSHCLKVNEHQDATEAANQNSDKKDRDAYASQFDFYSWMSFPYPPEAEK
IVSPARGSNTEGLLTLGLSQGKLKARRTGFKPYKRCSVEANENRVANAGSHCEEKGPKRL
RLEGEAQT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaactcatctggagaagaccttttcatcaaggcacgaaagccttatacgatt
accaagcaacgagagcgatggacagaggaggagcataataggtttcttgatgccttgaag
ctctatggccgagcatggcagcgcattgaagaacatattggaacgaagactgctgtgcag
atcaggagtcatgctcagaagttcttttcaaagctggagaaggaggcacacaataaaggt
gttccaatgggacaatcaattgacatagatatcccgcctccacgtcccaagaggaaacca
agcaatccttaccctcgaaagtctagttcagctgccacgacattgaccactccgcatgtg
ggagcaaaggatggaaaacttttatctacagcatcttcttcacactgtccacaagtagtg
gatttggagaaagaaccacctcatgagagacctactgaagaagaaaatccgaaaaatgga
aaagaaaatcaggatgaaaattgctcagaagccttcactttgctccaagaacataattgt
tcctctgattctactgcaaacaaaaattctatacctacacaggtggtgctgagaaacgct
tgcacttttcaggagtttgtgccttcgctgaaagaggtaataagtcaagatgtaacaact
gaatcttatgttactattgaacttaatggaaatcagaatatgaagaaaaatgatgccaaa
aagatagttcaagttaatggcacaagtggagcctcagtgtcagagaacactaatgctctt
cataagaagttggttcaaggtgagaaagcagatgatttgaattgtgcattgccaacagat
gggatgcaaggcactcagaactacccaaggaatgttcctgtacatgtactggatggcagc
gtaggagcgtgtaatcaaactacacctgcagatatgtcattccctgactccggtttccat
cctatggggaaggttcatggacagcctaacctgtttgcaaatccagcggcatctactact
actgaacatgaaagtaatgcatcaagatctactattcaccaatcgtttccagcttttcac
cctcccttcacaccattccaccatggtcaaaaggactaccaatcatttcaccacatgtcc
tcaactttttctagccttattgtgtcgtctctgctacaaaaccctgcagcccatgctgcg
gctagctttgcagccacattttggccttatgcaaatgtggaaaatacggaagactctcct
gcatgctcctctgctggaggttttccaccgacctcccctccaagtatggcagcaattgct
gctgcccnnnnnnnnnnnnnnnnnnnatttgcgcctgccactgtagctgctgcaactgca
tggtgggcagcccatggattgcttcccttgtgcgctcctgttcaaacttctttgagctgc
cctcccatgcccatgactgggggggttccatcagtgaatactgatcaagatcctgcagtg
atgacagagagaggcgagaattctcttcaaattccttctgcagaggatcaacaattggag
ccggaacacttggaagctgtggatgctcagcatttagcttcacaatcaccaaacaggtca
tcatcacactctgataatggaggtgcagagcctaatacagaattgaagtctgctgatgat
gagaaggctgtagcatcaactgctcaagttaatgattcagacaatgcaaagagtagaaaa
caggttgaccattcttcgtgtggctccaacacaccttccggcagcgaagtagagacagat
gcattagagaagcatgagaaaggcacagaagaaccagaagaacctaaagaaccaaaagaa
cttgatctaaatctcttagcatctgattctaattatcgtcgcagtagaagtatcagcaac
atgaatgatccatggaaagaggtttctgaagagggacggatggcctttcaagcgctattc
gcaagagaggtactgccccagagtttttcaccgccttcacactgcctcaaggttaatgag
catcaggatgctacagaagcagcaaatcaaaattctgacaagaaagatagagatgcgtat
gcatcacaatttgacttctattcgtggatgtcatttccgtatcctccagaagcggagaaa
attgtgtcaccagcacgaggcagcaacacagaagggctactgacactaggacttagccaa
gggaaactcaaggcccgtcgaacaggattcaagccttacaagaggtgctccgtagaggcc
aacgagaaccgggtggccaatgccggcagccactgcgaagagaagggcccgaagaggtta
cgcttagaaggggaagctcaaacttga
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