Pyrus x bretschneideri (Chinese white pear): 103928534
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Entry
103928534 CDS
T03446
Name
(RefSeq) pre-mRNA-splicing factor RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103928534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103928534
03041 Spliceosome [BR:
pxb03041
]
103928534
03036 Chromosome and associated proteins [BR:
pxb03036
]
103928534
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103928534
Spliceosome [BR:
pxb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103928534
Complex B
103928534
Complex C
U2 SnRNP specific factors
103928534
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103928534
TFTC complex
103928534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
103928534
NCBI-ProteinID:
XP_009335862
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MAVSEEECSSAKSRSSSSASSSTSSYYLAKCVLRGSVVLQVLYGHIRFPNSYDVVFGKET
SIELVIIGEDGIVQSICEQPVFGTIKDISILPWNDKFCTQIPQMVGKDLLVVISDSGKLS
FLSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENRLAMFSVSLSG
GSDIIDKKILFPPENEQDGSAARVQKNSIQGTIWSMSFISKDPRQSSKGHSPVLAIILNR
RDAVLNELLLLGWNIRDQDIYVISTYVEDGPLAHSIVEVPHSPGFAFMFREGDALLMDLR
DAHNPFCVCRTSPNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSD
LDPMCIDGDKYNVNVTYKHVCSWSWELGNVKNPRMIVCADTGEYFMIEIIFGPDGPKVQE
SECLYQGSPSKALLWAEGGFLAALLDMGDGMVLKMENGMLLYTSPIQNIAPVLDMSVVDY
HDEKHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFL
VLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKNAVRVCLPTKAA
HSEGIPLPSPVFTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRVLSSHQYEIYEM
QHLSLQNELSCVSIPHKCFGQTNNTLPFGVDVSNTFVIGTHKPSVEVLSYVPNEGVTILA
SGMISLTNTLGTAISGCIPQDVRLVLVDRLYVLAGLRNGMLLRFEWPAASAMPLSVLTSH
SLVGRQIYDKLYEKTKDYYPVELQLIATRRIGITPVFLVPLSDSLDGDIVVLSDRPWLLH
TARHSISYTSISFQSSTHVTPVCYVECPKGILFVAENCLHLVEMVHSKRLNVQKFHLGGT
PREVLYHSESRLLLVMRTDLIDDTCSSDVCCIDPLSGSVLSSFKLEAGETGKSMELVRVG
NEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHVQNSDSGSMTFCSKAGSSSQRAS
PFHEIVGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRVAYSSTWSGMVLAICSYLD
RYFLASAGNAFYVCGFPNDNPQRVRKFNVARTRFMITSLTTHFTTIAVGDCRDGVLFYAY
HEDSKKLQQLYFDPCQRLVAGCILMDVNTAVVSDRKGSIAVLSSADYSEDSASPECNLTV
SCAYYMGEIAMSIRKGSFSYKLPADDLLKGSDGNIDFSRNAIIVSTLLGSIITFVPISRE
EYELLEAVQDRLVVHPSTAPILGNDHNEYRGRENPAGVPKILDGDMLSQFLELTNMQQED
VLSSPFGAQGTPKPSLKSRNVPIPVNQVVQLLERVHYALN
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcagaggaagagtgttcctccgccaagtcccgatcgtcgtcgtcggcctcc
tcctccaccagctcttactacctcgccaagtgcgtcctccgcggaagcgtcgttcttcag
gtcctctacggtcacatccgcttccccaactcttacgacgtcgtcttcggcaaggagact
tcaatagagttggtaataattggggaagatgggattgtacaatctatatgtgagcagcct
gtgtttggtacaattaaagacatttccattctaccctggaatgacaaattctgcacacaa
atcccgcagatggtgggtaaagaccttttggttgttatttctgattctgggaagctctcg
tttctctcgttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttct
aatcctggaaattcaaggaatcagcttggaagaatgctagcaatcgattcaagtggctgt
ttcattgctgctagtgcttatgaaaaccgtttggctatgttctctgtttcgttgtctgga
ggcagtgacattattgataagaaaatactatttcccccagaaaatgaacaagatgggagt
gctgccagagtccagaaaaacagtattcagggtactatatggagcatgagctttatttca
aaggatcctaggcaatcaagtaaggggcatagtcctgtacttgccattattctaaatagg
agagatgcagtccttaatgaattgctgttactgggatggaatattagggatcaggatata
tatgttatttctacatacgtagaagatggaccgttagcacatagtattgttgaagttcct
cattcccctggatttgcttttatgtttagggagggtgatgctctcctaatggatcttaga
gatgcacacaaccccttctgtgtctgtagaacaagcccaaatttcttatccaatgtggtt
gatgaggcaaattttgttcaagagtcatctagaggatgtgatctgtctagagtacttcag
gttgatgatgaaggaggtttattcaatgtagctgcttgtgctttactagaactgagcgat
ttagatccaatgtgcatagacggtgataaatacaatgtgaatgtgacttacaaacatgtg
tgttcatggtcttgggaactggggaatgtaaaaaatcctagaatgatcgtttgtgcagat
acaggagaatatttcatgatcgaaattatctttggtcctgatggccccaaggttcaagaa
tctgaatgtctttaccaaggttcaccatccaaggcacttctgtgggctgaaggcgggttt
cttgctgcactactagacatgggggatggaatggtcttgaaaatggaaaatggaatgctt
ctttacacaagccctattcaaaatattgccccagtgttggatatgtcagttgtggattac
catgatgaaaaacatgatcaaatgtttgcctgttgtggagtggcacctgagggatcatta
aggattattagaagtggtatcagtgtggaaaagctattaaggactgcgcctatttatcaa
ggaattactggtacttggacattacgaatgaaagtaattgattcttatcattcctttctt
gtgctgtcatttgtagaggagaccagggtattgtcagttggtttaagctttactgatgtg
acggattctgttggttttcagcctgatgttagtactttggcttgtggtattgtaaatgat
gggttgctggttcagattcacaaaaatgcagttagggtctgtttgcccaccaaggctgcc
cattctgaaggtattccacttccttctcctgttttcacatcttggttcccagaaaatatg
agtatcagtttgggggctgttggccataatctcattgttgtttcttcatctaatccatgc
tttttattcattcttggggtcagagtgctttcgtcacatcagtatgaaatttatgagatg
caacatttgagcttgcaaaatgaattatcatgtgtttctattcctcataaatgttttggg
caaaccaataatactctcccatttggagtcgatgtaagtaatacctttgttattggcaca
cacaagccctcagtggaagttttgtcttatgtgcctaatgaaggcgtgacaattcttgct
tctgggatgatctcattaacaaatactttaggaacagctatcagtggctgcattcctcaa
gatgtaaggcttgtattagttgacagattgtatgtccttgcgggattgaggaatggaatg
ctacttcgtttcgaatggcctgctgcctctgcaatgcctctgtctgttttaaccagtcac
agtcttgttggccgacaaatatatgataagttatatgagaagacaaaggactattatcct
gttgagctgcaattgattgccactcgtcgcattggcatcactcctgttttcttggttcct
ttgagtgactcgctagatggtgatatagttgttctcagtgataggccttggttgttacat
actgcaaggcacagtatctcgtacacttctatctcatttcaatcatcaacacatgtcact
cctgtatgttatgtcgaatgccctaagggaattttatttgttgcagagaactgtctacat
ttggtagagatggtgcacagcaagaggcttaatgtgcagaagtttcatcttggaggcact
ccaagagaggtcctttatcatagtgaaagcaggctattgcttgtgatgaggactgatttg
attgatgatacatgctcatcagatgtatgttgcattgatcctctaagtgggtctgtgctg
tcatccttcaaacttgaagccggtgaaacaggaaaatcaatggagttagtgagggttgga
aacgaacaagttcttgtggttgggacgagcttatcttctggtccagccataatgcccagt
ggtgaggctgagagtaccaagggccgtcttattgttctttgtcttgaacacgtgcaaaat
tcagacagtggctcaatgacattctgctcaaaggcagggtcatcttctcaacgagcatct
ccgtttcatgaaattgttggatatgccacagaacagctttctagcagtagtctctgcagt
agtccagatgacactagctgtgatggaattaaacttgaagaaactgaagcatggcagttt
cgagtcgcttattcatccacatggtctggaatggtacttgcaatctgctcttatcttgat
cgttacttcttggcttctgctggcaatgctttttatgtatgtggtttccctaatgacaat
ccacaaagagtgagaaagtttaatgtggcaaggacacgttttatgattacatcattgact
acacatttcactacaattgctgttggtgattgtcgtgatggtgtccttttctatgcttat
catgaggattccaaaaagctgcagcaactgtactttgatccatgtcagagattagttgct
ggttgcattcttatggatgtcaatactgctgttgtttcagatcggaagggaagcattgct
gtcctttcatctgcagattactctgaagatagtgcaagtccagaatgtaatttaacagtg
agctgtgcttattatatgggggagatagctatgagcatcaggaaggggtcattttcatat
aaacttccagctgatgatctattgaagggcagtgatggaaatattgacttctctcgaaat
gctatcattgtgagtacgctgcttggaagcataataaccttcgttccaatatccagggaa
gaatatgaactcttagaagctgtccaagatagactggtggtgcatccgtcaactgctcct
attcttgggaatgatcacaatgagtatcgtggtcgtgaaaacccggcgggagtgcctaag
atacttgacggtgacatgctctctcaattcttggagctcacaaatatgcaacaagaggat
gtactatcatcaccttttggtgcacaaggcacaccaaagccctctctgaaatcacgaaat
gtgccaatacctgttaatcaggttgttcaactcctagagcgggttcattatgccttaaac
taa
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