Pyrus x bretschneideri (Chinese white pear): 103929368
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Entry
103929368 CDS
T03446
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103929368
03083 Polycomb repressive complex
103929368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103929368
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103929368
Histone modification proteins
HAT complexes
HATB complex
103929368
HDAC complexes
Sin3A-HDAC complex
103929368
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103929368
PRC2.2
103929368
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103929368
Heterochromatin formation proteins
Other heterochromatin formation proteins
103929368
Chromatin remodeling factors
NuRD complex
103929368
NuRF complex
103929368
NuRF complex (fruit fly)
103929368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD_LRWD1
eIF2A
MIOS_WD40
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
103929368
NCBI-ProteinID:
XP_009336834
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MGKDDEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPIDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATAKNKTLEAMQIFKVHEGVVEDVAWHLRHE
NLFGSVGDDQYLLIWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagacgacgaagaaatgaggggagagatagaggagcggttgataaacgaggag
tacaagatatggaagaagaacactccgtttttgtacgatctggtcataacccatgcccta
gaatggccatcgcttactgtggagtggcttcccgaccgagaggagcctccggggaaggac
tattcggtgcagaagatgattttggggacccacacctccgagaacgagccgaattacctt
atgctcgctcaggttcagctgccgttggaggacgccgagaacgatgcgcggcattatgat
gatgatcgagctgaggttgggggtttcggttgcgccaacggaaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgttatatgcctcagaatccatttatt
attgccacaaagactgtcaatgctgaagtttttgtgttcgattatagcaaacatccatct
aagcctcccatagatggtgcatgcagtcctgatttgaggctgaggggccacagcactgaa
ggatatggtttgtcgtggagtaagttcaagcagggtcatttactcagtggttctgatgat
gctcagatatgcctatgggatattaatgcgactgctaagaacaaaacccttgaagctatg
cagatatttaaggttcatgaaggtgtagtagaagatgtagcatggcatttgaggcatgaa
aacttatttggttctgttggcgatgatcaataccttcttatatgggatctccggactcca
tcagttaccaagcctgtccaatctgtagttgctcatcaaagtgaggttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatcaactgacaaaactgttaagttg
ttcgatctacgcaaaatcaatactgcactccacacctttgattgtcataaggaggaggtt
ttccaagttggttggaatccaaagaatgaaactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcagaatcgatgaagagcagacacccgaggatgcagaa
gatggccccccagagttgctttttattcatgggggtcacaccagcaaaatatctgatttt
tcgtggaacccctgtgaagattgggttatttctagcgtcgctgaagataacatactccaa
atatggcagatggcagagaacatttaccatgacgaagatgatttacctgaagaaccggca
aagccctag
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