Pyrus x bretschneideri (Chinese white pear): 103930408
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Entry
103930408 CDS
T03446
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103930408
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103930408
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
103930408
NCBI-ProteinID:
XP_009338020
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All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MEEVRQWRRWGILGVLSVTLLGLLFFLHNNNGASETITISGRRALRSVNGNELNFNQMLT
QQTHNTVELNNGIVRITFSYPGGDVTGIQYKGIDNLLEIKNPQSNRGYWDLVSKNGLDRL
QGTTFNIVTSTADQIEISFNKTYDISLGDSTLPLNVDKRYIMQRGRSGFYAYAIYERLEG
WPELHLGQTRLVLKLREDKFQFMAVSDDRRRFMPTAKDRDGDHAQALAYREAVLLTNPSN
PEFKGEVDDKYQYSSDVKDIKVHGWISTDDAIGLWMITPSTEFPGPFKQELTSHVGPTSL
TVFLSSHYVGRGFGLTCAEGEAWKKVFGPVFVYLNSDIPSSNASFSLWENAKEQMYEEVK
SWPYNFTQSEDFPSSDERGSVAGQLLIRDSYIHEGLDSASYAYVGLAARGYAGSWQMECK
GYQFWTQADKQGYFYIKDVRPGNYSLYATVPGFIGDYKYEYDITIEPASEINLANITFEP
PRNGPTLWEIGIPDRSAAEFNIPDPYPTLVNRLFTDNYANKFRQYGLWERYGDYYPDHDL
IYTVGTDNYNDDWFYAHVTRNRNGTHEATTWQIVFQLEDVWTGDYTLQLALASATYAELE
VRFNNQNDTPHFSTGLIGKDNAIARHGIHGLYWLFSVDVPSYRLQEGYNTIYLTQSRNWG
PFAGVMYDYIRLEGPPPE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgaggcaatggaggagatggggtatcctcggagttttatcagtcacactg
ctgggtttgctcttcttcctccacaataataatggtgcttctgagacgataacgatttct
ggaaggcgagcactcaggagtgttaatggtaatgagctcaacttcaaccagatgctaaca
caacaaactcataacacggtggagctgaacaatggcattgtccgaatcactttttcttat
cctggaggagatgtcactggaattcaatacaagggaattgacaacttgctcgaaatcaaa
aacccccaaagcaatagaggttactgggatcttgtctcgaaaaatggcttggacagacta
caaggaacaacatttaacattgttacatcgacagcagaccaaatagagatttcttttaat
aaaacttatgatatttccctcggtgattcgacgctacccttaaatgttgacaaaagatac
ataatgcagcgtggccgctctgggttctatgcatatgccatatatgagcgtctagaaggg
tggccggaattgcacctaggtcaaacaagactggttttgaaacttcgagaagataaattt
caattcatggctgtatcagacgacagacgaagattcatgccaacagccaaagatcgcgat
ggagaccacgctcaggcccttgcctatcgcgaagctgttcttttaactaatccaagcaat
cccgagtttaaaggagaggtggatgacaaataccaatactccagtgacgtcaaagacatc
aaggttcacggttggattagcactgacgatgctataggtctttggatgatcacacctagt
accgagtttccagggccgttcaagcaggagcttacctctcatgtgggaccaacttccctc
actgtgtttcttagtagtcactacgtcgggagaggttttggactgacctgcgcagaaggt
gaggcttggaagaaggtttttggtcctgtctttgtgtatcttaactcggacattccaagc
tcgaatgcatccttctctctctgggaaaatgcaaaggaacagatgtatgaagaagtaaag
agttggccgtacaatttcactcagtccgaagactttcctagctccgatgaacgtggatca
gttgctggtcagttactaatacgggattcgtacatccacgagggcctagattcagcaagt
tatgcttatgtgggattggctgcacgcggatacgcgggatcatggcaaatggaatgcaag
ggttatcagttctggactcaagctgacaagcaaggttatttctacataaaagatgttcga
ccggggaactatagtttgtatgcaactgttcccggcttcattggggactacaagtacgag
tatgatattacaattgaaccagcaagtgaaattaacttagctaatattaccttcgaacct
ccgagaaatggtccaaccttgtgggagattggcatcccggatcggtcagccgcagagttc
aacataccggatccatatccaacccttgtgaaccgtttgttcactgacaattacgcaaac
aagtttaggcaatatggcttgtgggaacgatacggagattactaccctgaccatgatctc
atctacaccgtcggcacagacaattacaatgatgattggttttacgctcatgtgacaaga
aacagaaacggtacacacgaggcgacgacatggcaaattgtatttcaacttgaagacgtt
tggaccggtgattatacgctccaattggcattggcttcggcaacctatgctgaactggag
gttcgatttaacaaccagaacgacacacctcatttttcgacagggctaatagggaaggac
aatgccatagcaaggcatggaattcatggtttgtactggcttttcagtgttgatgtgccg
agctatcgactacaagaaggatacaacaccatataccttactcaatcaagaaactgggga
cctttcgccggagttatgtacgactacatccgactggaaggacctccaccagagtga
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