Pyrus x bretschneideri (Chinese white pear): 103930866
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Entry
103930866 CDS
T03446
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103930866
03036 Chromosome and associated proteins [BR:
pxb03036
]
103930866
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103930866
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103930866
SLIK complex
103930866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
COG4_m
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
103930866
NCBI-ProteinID:
XP_009338532
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MDVQYQSEGEHDNASRLHNEVAADEGMGTRVSNLPSSGRRTTVAGKWGSTFWKDCQPMHS
QGGSDSGQETKSRLDHRNAVGSEDNSSDVGEDRIDFEHDGRPKISKGQQGHSDIPADEML
SDEYYEQDGEEQSESMHYRGFHHSVGSNSRPQSKPNSVSNHAHHRTSRNDIEDFEDGDDA
NEDLDAADADYEEDEDEDDPDDADFEPDYGVGSGRTAQKDKNWNGEDSDEDNDSDDELDV
SDEDDSYYGKKPKRRHHGNAKSTRERKSYHSSSRQRRGKSSFDDDESSAEDSESDGDEDV
KGIKRKGVHTRKSNGRRNVLGQNGEVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEI
EEEDGDYIEKVLWHQPKGMAEDALRNNRSTDPMLLSHLFDSEPDWNNMEFLIKWKGQSHL
HCQWKSIFELQNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQ
VERIIADRIRQDSSGDVGLEYLVKWQGLSYAEATWEKDVDIGFAQDAIDEFKAREAAMAV
QGKMVDLQRKRSKGSLRKLEEQPEWLKGGSLRDYQLEGLNFLVNSWRNDTNVILADEMGL
GKTVQSVSMLGFLQNAQQINGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREV
CQQYEFNNDKIGGRPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYT
TLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELAN
LHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQ
VSLLNIVVELKKCCNHPFLFESADHGYGGDSSSKDGSKLERIILSSGKLVILDKLLMKLH
ETKHRVLIFSQMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFL
LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEED
ILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGTLFDKNELSAILRFGAEELFKEDKNDE
ESKKGLLSMDIDEILERAEKVEEKETAEEGNELLSAFKVANFGTGEDDGSFWSRWIKPEA
VSQAEEALAPRATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKSDYTVTSAPMIGG
ASAQVRRWSSGNLSKRDALRFSRAVMKFGNESQIALIVGEVGGAVAAASTEAQVELFNAL
IDGCTEAVEVGSLDPKGPLLDFFGVPVKAGDLLNRVRELQYLAKRISRYDNPIAQFRVLM
YLKPSNWSKGCGWNQIDDARLLIGIYYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFL
PRAPNLRDRANALLEMEIAALGGKNANAKVGRKSSRDRETTVNVSLARSGLKKGKTGSSR
VNVQMNKGRPLKPQKVEPLVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLKSLE
RLQTISANLPKEKVLSKIRSYLQLLGRTIDQIVLENEEEPYGQDRMTMRLWKYVSTFSNL
SGERLHQIYSKLKQQQDVEAGPSHMNGSTSGPFGRDSDPSPFSFPSDRQRGHDTAKFEAW
KRRRRGEADSNFQVQAPSQRNMNNGTRLTDPSSLGILGAGPSENKRAVNERPYRTRQAGL
PTKQGFTSRIK
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcagtatcaaagtgaaggcgaacatgacaatgctagtaggttgcacaatgag
gtagcagcagatgagggtatgggtacaagagtttccaatttgccctcttctgggaggagg
acaactgtggctggaaagtggggttcgaccttttggaaggactgtcagcctatgcactca
cagggtgggtctgattctggtcaggaaactaaaagtaggttggaccacagaaatgctgtt
ggatctgaagataattcttcggatgtcggggaagatagaatagattttgaacatgatggc
aggccaaaaataagcaagggacaacagggccattctgacatccctgcagatgaaatgcta
tctgatgaatattatgagcaggatggggaagaacaaagtgaatcgatgcactatagaggg
tttcatcattccgttgggtcaaattctaggccacaatcaaagcctaattcagtcagtaac
catgcacatcatagaacttctagaaatgatattgaagattttgaagatggtgatgatgcc
aacgaagatcttgatgctgctgatgctgattatgaagaagacgaagatgaagatgatcct
gatgatgcagattttgaacctgactatggtgttgggagtggtcgcactgcacagaaggat
aaaaattggaatggtgaagattctgatgaagataatgatagtgatgatgagcttgatgtt
tcagatgaagatgattcttattatggaaagaaacctaagaggaggcatcatggtaatgct
aaatcgacgagggaacgcaaatcatatcattcatctagtcgccaaagaagagggaagtca
tcatttgatgatgatgagtcctcagcggaggactctgagagtgatggtgacgaggatgtt
aaaggtatcaaaaggaaaggtgtacatacccgcaaaagtaacggccgaagaaatgttctt
ggacaaaatggtgaggtgcgaacttctactaggtctgttaggaaggtctcatatgttgaa
agtgatggaagcgatgaagtggaagaaggaaagaaaaagaagtcccagaaggaggagatt
gaagaagaggatggtgactatattgaaaaggtgctctggcatcagcctaaaggcatggct
gaagatgcactcaggaacaatagatcaacggatcctatgctattaagtcacctgtttgat
tctgagccagattggaataatatggagttcttgattaaatggaaagggcagtcccatttg
cactgtcagtggaaatcaatttttgagctacaaaatcttagcggttttaagaaagtttta
aattacactaaaaaggtgatggaagatgccaggtacaggaacacaatatcacgtgaggag
attgaggttcatgatgtgagcaaggaaatggacttagatctcatcaagcagaatagtcag
gtggagagaataattgcagaccgcatcaggcaagatagctctggtgatgtgggtctggaa
tatctagtcaagtggcaagggttgtcttatgctgaagcaacatgggagaaggatgtagat
attgggtttgcacaagatgctatcgatgagttcaaggctcgtgaagctgcaatggctgta
caaggaaaaatggtggatctccagcgcaagaggagcaaaggaagtctacggaagctcgag
gaacagccggaatggttgaagggaggaagtcttcgtgattatcagcttgagggtttgaat
tttcttgttaatagttggaggaatgataccaatgtcattttagctgatgaaatgggtctt
ggtaaaactgttcaatcagtttcaatgcttggttttttacagaatgctcaacagatcaac
ggcccatttcttgttgttgtaccattatccactttgtctaactgggccaaagaatttagg
aagtggctccctgatatgaatattattgtgtatgttggtactcgtgcaagccgagaggtt
tgtcaacagtatgaatttaataatgataaaataggaggccggcctataaaattcaatgca
ctattgacgacatatgaggtggttttaaaggataaggctgttctttccaagatcaagtgg
aattatctaatggttgatgaagctcatagattaaagaacagtgaggcacagttatacaca
accctcttggaatttagcacgaagaacaagttgcttataactggtactcccttgcagaac
agtgtagaggagttatgggctctgcttcacttcctcgaccctgataagttcaagaataaa
gatgattttgttcagaattacaagaatctcagttcattcaatgagattgagcttgctaat
ctgcatatggaattgaggcctcacattcttcgaagagttatcaaggatgtggaaaagtct
ttacctcctaaaattgaacgaattcttagggttgaaatgtctcctcttcagaaacagtac
tataagtggattttggaacgcaactttcataacttgaacaaaggagttcgtgggaatcag
gtttcgttgttgaatattgtggtagagttgaagaaatgttgtaatcatccctttctgttt
gaaagtgctgaccatggttatggtggggactcaagtagtaaagatggcagtaaattggag
aggattattttaagcagcggaaagttggttatacttgataagcttcttatgaaattgcat
gaaacaaagcaccgtgttctcatattttcccagatggtaagaatgttggacatactggcg
gagtatatgtcaattagaggttttcaatttcagcggcttgatgggagtacaaaggccgat
ttacgccaccaagcaatggaacattttaatgcgcctggtagtgaagatttttgcttcctc
ctttcaactcgagcaggtggccttggtatcaaccttgccacagcggatacagtaataata
ttcgactcagattggaatccccaaaatgaccttcaggcaatgagcagagcgcacagaata
gggcaacaagaagttgttaacatctatagatttgtcacaagcaaaagtgtcgaggaagat
attctggagagagctaagaaaaagatggtgcttgaccatttggtgattcaaaaattaaat
gcagagggtaggttggagaagaaagaatctaagaaggggactttatttgacaaaaatgag
ctgtctgctattctacgatttggggctgaggaacttttcaaggaagacaaaaatgatgaa
gagagcaagaaaggactcttgagtatggatattgatgagattcttgaaagagcagaaaag
gttgaagagaaggaaactgcagaggaagggaatgaattgttgagtgcttttaaggttgca
aattttggtactggtgaagatgatggtagtttttggagtcgttggataaagccagaagca
gtatcccaagccgaagaagcacttgctcctcgtgctacaaggaatactaagagctatgca
gaagccgatcagcctgatagaagtaataaaagaaaaaagaaagaatctgagcctcaggaa
agagtccagaaaaggcgaaaatcagattacacagttacctcagcaccaatgattggcgga
gcatcggctcaagttaggagatggtcttctgggaacttatcaaagagagatgcattgcga
ttttctcgtgctgttatgaaatttgggaatgagagccaaattgccttgatagttggggag
gttggtggtgccgttgcagcagcttcaactgaagcacaggttgagctttttaatgcattg
attgatggctgcacagaagcagtggaagtgggtagtctggacccgaaggggcccttgctg
gatttttttggtgtccctgtcaaagctggtgatctgctcaatcgtgttcgtgaacttcag
tacctggcaaaacgcattagtcgatatgacaatcccattgctcagtttcgtgtcttgatg
tacctcaaaccttcaaattggtcgaagggttgtggttggaatcaaattgatgatgcaaga
ttgcttattggaatatactaccatggctttggaaattgggaaaagatacgtttagatgaa
aggcttggccttacaaagaaaattgctccagtggaacttcaacaccatgaaacattttta
ccccgtgctccaaatttgagagatcgtgctaacgctcttttggaaatggaaattgcagcc
cttggtggaaagaatgcaaatgctaaagtgggtcgtaagtcttcaagggatagggaaact
actgtcaatgtttctttagctcgcagtgggctaaagaaaggaaaaactggttcttctaga
gttaatgttcaaatgaacaagggtagaccactgaaaccccagaaagttgaacctttagtg
aaagaggagggtgaaatgtcggatgatgatgaagtgtatgagaagttcaaggaggagaaa
tggatggaatggtgtgaagagatgatgaaggatgaaactaaaaccttgaaaagtcttgaa
cggttgcagacaattagtgccaatcttccaaaggaaaaggtgctttccaagattcgaagt
tatctacaacttcttggacgaacgatagatcaaattgttttagaaaacgaggaggaaccg
tatggacaagataggatgaccatgcgcttgtggaaatatgtttctaccttttcaaatctg
tccggggagagacttcatcaaatatattcaaaacttaaacagcaacaggatgtggaggct
ggcccttcccacatgaacggctccacttctggccccttcggcagagacagtgacccttct
cccttctccttcccttcggacaggcaaagaggtcatgatacagccaagtttgaagcatgg
aaacggaggaggagaggggaagctgatagtaatttccaagttcaggccccatctcaaaga
aatatgaataatggtacccggttaactgatccaagctcattagggattcttggtgcagga
ccatcagaaaataaacgcgctgtgaatgaaaggccttacaggacgcggcaggcaggttta
ccaacaaaacaaggttttacatcacgtattaagtag
DBGET
integrated database retrieval system
