Pyrus x bretschneideri (Chinese white pear): 103931145
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Entry
103931145 CDS
T03446
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103931145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103931145
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103931145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
GTP_EFTU_D4
MMR_HSR1
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
103931145
NCBI-ProteinID:
XP_009338835
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MPRKVNYKIDYDDEYDAYEDYDYGYDDDDESGIEKNVTGKAVESKRETERPKVWRCSICT
YDNEESMSACDICGVLRNPLSKSNSDNKTVEGRCKDSGASIMAKSIFASLLHQKPKQAVL
FHQQKDDSVIEEGNNFHRLWDFKRPVHEFHKTFNVHNKHHIDIASFKFDVPSPDDVVSNG
LWSSRTGSKAGVIDLKSSKASLNVAKKSSAVIQSSAEWSGSSSTMAQTKEQDRLDEENGL
ENQTVSYHHGSSGSITVQENGKFSGSSSASQPTSRRDSGVQSTTSSEIRGKPQSVTSGLK
NMTLDAQSGYSNNGSVRESRSQADYKPEKWMLPDQAVDTLTQLNLAIVGHVDSGKSTLSG
RLLHLLGRISRKEMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSRKY
HVVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAFEAGMDGGKGQTREHAQLIRSFG
VDQIIVAVNKMDIVEYSKDRFDLIKQTLGTFLRSCGFRDSLVSWIPLSAMENQNLVAAPS
DVHLSSWYHGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRS
GFKVLVMPSGESGTVRALERDSQACAIARAGDNVAVTLQGIDGGRVMAGGVLCHPSFPVA
VAKHLELKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDPKTGKVTRKAPRCLT
AKQSAVVEVILHAPVCVEEFSNSRALGRAFLRALGSTIAVGVVTRIIEEQK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactataaaattgattatgatgacgagtatgatgcctatgaagat
tatgattatggctatgatgatgatgatgagtccggaatagaaaagaatgtaacaggcaaa
gcagttgaatcaaaacgggaaactgaaaggcctaaggtctggcgttgttccatttgcaca
tatgataatgaagagagtatgtctgcatgtgacatttgtggggttcttcgcaaccctttg
tctaaaagcaatagtgataataaaacagttgaaggcagatgcaaagattctggagcatcc
ataatggccaagtctatttttgcatcattgctgcaccagaagccaaaacaggctgtacta
tttcatcagcagaaagatgattctgtgatagaagagggcaataacttccataggctctgg
gatttcaagagacctgttcatgaattccataagacttttaatgttcataacaaacaccat
attgatatagcttctttcaagtttgatgttccatccccagatgatgtggtttctaatgga
ttgtggtcctccagaacaggttcaaaagctggtgttattgacttaaaatcttcaaaagct
tccctgaatgtggctaagaagagcagtgcagtcatacaatcaagtgctgaatggtcaggt
agctcatctacaatggcacaaacaaaggaacaagatagattagatgaggaaaatgggttg
gagaatcagacagttagttatcaccatggaagtagtggctctattactgtacaagaaaat
ggtaaattttcagggagttcatctgcttcgcagccaacaagcagacgtgacagtggggtt
cagagcactacttcttctgaaattaggggcaagccacagagtgttaccagtggcttgaaa
aacatgactttggatgctcaatctggatattctaataatggtagtgttagagaatctcgt
tcacaagcggactataaacccgagaagtggatgcttcctgaccaagctgtagatacactg
actcaactgaatcttgcaatagttggtcatgttgattccggaaaatcaacactctcaggt
aggttgcttcaccttttgggaaggatatctcgaaaagaaatgcacaaatatgagaaagag
gcaaagttgcagggaaaggggtccttcgcatatgcttgggcattggatgagagcgcagaa
gaaagggaaagaggaataactatgacagtggctgttgcatattttgattccagaaaatat
catgttgttgtgctcgactctcctggccataaagattttgttccaaacatgatatctggg
gcaacacaagctgatgctgcgatacttctcatagatgcctcagttggtgcatttgaagct
ggtatggatggcggcaagggacagacaagggagcatgcgcaacttattagaagttttggt
gttgatcaaattatagttgctgttaacaagatggatattgttgagtactccaaggatcga
tttgatttgatcaaacagacacttggaacatttctccgttcttgtggtttcagagattct
ttggtgtcttggataccattgagtgccatggaaaatcagaatttggtagcagctccttct
gatgtccatttatcttcttggtaccatggaccttacctgttggatgcaattgattccctc
caacctcctacaagagagttttcaaagccattgctgatgcctatatgtgatgttatcaaa
tcttcctcacaagggcaggtgtctgcttgtggtaaattggaagcgggagctcttcgaagt
ggatttaaggttctggtgatgccttcaggagaatcagggactgtacgtgcgttagaacgt
gactctcaggcttgtgcaattgcaagagctggagacaatgtggctgttactctgcaaggc
attgatggaggtcgtgtgatggcaggaggtgtgctctgtcaccctagttttccagttgca
gttgcaaaacatttggaactaaaggtgcttgttttggatgttacaaccccgattttaatt
ggctcccagttggaattccacatacaccatgcgaaggaggctgcgagagttgtaaaaata
tcatcattgcttgatccaaagactggcaaagtgacaagaaaagctcctcgctgtcttact
gcaaagcagagtgcagtcgtagaggtaattcttcacgcgccagtttgtgtggaagagttt
tctaattctagagctctggggagggcatttttaagggcattaggaagcactattgccgtc
ggcgttgttacccggattatagaggagcagaagtag
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