Pyrus x bretschneideri (Chinese white pear): 103931149
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Entry
103931149 CDS
T03446
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pxb01001
]
103931149
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103931149
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103931149
Protein kinases [BR:
pxb01001
]
Serine/threonine kinases: Other
Other
103931149
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103931149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
LisH
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40
Motif
Other DBs
NCBI-GeneID:
103931149
NCBI-ProteinID:
XP_018498988
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MEAAMDEQQNLGQGQGEEGEPGTPVPPPPPAAPESQSQGGEEEEDEEEEEEVKNEGDELV
AKAQKLMDKITAAPDNPNPTVLHALASLLETQESRYMEENGHSSSNGRASHYIGRLGTSV
REHEDFFELISSKYLSDTRYSVAVQAASARLLLTCSLTWIHPHVFEDAVLERIKDCVMDE
TSISSVEYQKWKHDLGGKEVSDFEMLKTYSTGLLAVCLAGGSSVVEDVLTSGLSAKLMRY
LRVRVLGETSITQKDVTHLAESKNTLGAICIRGRDEGRARVRQILETNHFDDPKITDERC
LDDRIVEGDHVRSISRQTFGEEQWVDGAKPPDGLAEEVEINDADGKMKSGDFDEIGRDDS
SRRRPNRGWARSRGKGRTNEGVVENEQLLTSPGSGSQLGHGRSVKDRSSLKNSDVKKIPD
SRKSADVFFLERADNDDCFQDCRVGCKDISELVKKAVRAAEAEARAANAPAEAIKAAGDA
AAEVVKSAALEEFGTTNNEEAAVLAASRAASTVIDAANSVEVSRSSSGINAESMTSSSTE
PENHVDTEEYFILDAESLAQLREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRNS
RHREASKVAMLLPDVMKLICALAAHRKFAALFVDRGGVQKLLAVPRVAQTFFGLSSCLFT
IGSLQGIMERVCALPSDVVYQVVELALQLLECSQDQARKNAALFFAAAFVFRAVLDAFDA
HDGLQKLLGLLNDAASVRSGVNSGALGLPSSGSLRNDRSPAEVLTSSEKQIAYHTCVALR
QYFRAHLIMLVDSIRPNKNTRSAARNLPSVRAGYKPLDISNEAMDAVFLQLQKDRKLGPA
FVRTPWPAVDKFLGSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVN
STVSSNRVAIAVILDAASVGGSYVDAEIIQSALNVLVNLVCPPPSISCKSPILAQGQQSA
QPSTGPSGESVVADRGSTAAPGTQFNSSSTHAPVATPTSGLVGDRRISLGVGAGCAGMAA
QLEQGYRQARESVRANNGIKVLLHLLQPRLYSPPAALDCLRALACRVLLGLARDDTIAHI
LTKLQVGKKLSELIRDSGSQTNGTEQGRWQAELSQAAIELIAIVTNSGRASTLAATDAAM
PTLRRLERAAIAAATPITYHSKELLLLIHEHLQASGLATTAASLLKEAQLMPLPSLAAPS
SLVQQATQEAPSGQIQWPSGRTSSGFLTSKSKITAKDEELKVDPTFSYTKKKPLVFSPNF
GLQSKNQSNDSHLTSPRKVFSAAKQFSASANASETPSVSLPKPTTDTESHCKTPIGLPMK
RKLSELKDPGCLLLSGKRLHTGDYGLRSPVCPTPTTVRKSALLTDPVGFSTPTANLRDQY
GRSTPACLPSDYQDDNQYGSSSVNLATPGSQFGLQSDPQPSNSERLTLDSVVIQYLKHQH
RQCPAPITTLPPLSLLHPHVCPEPKRNLDAPSNATARLGTREFRNIYGGVHGNRKDRQFV
YSRFRPWRTCRDDSGTPLTCISFLSDSSHIAVGSHGGELKIFDSNSSNVLESCASHQSPV
TLVQSRLSGETELVLSSSAQDVRLWEASSVSAGPMHSFEGCKAARFSNFGDIFAALSTEP
ARREILLYDIQTSQLESKLSDTSSSSTGRGHVYSQIHFNPSDTMLLWNGVLWDRRVSTPI
HRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTTITFNARGDVIYAIL
RRNLDDVMSAVHTRRVKHPLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLIT
MDDQDDMLASARVYEIGRRRPTDDDSDPDDAESEEEDEDSEDDDDGDVDPILGPDLDGDD
SDMDDMSNGDDDDSVSDDDDDDDGDFIVDDFETGGGMLEIVTDGEEDDDDDSDGMESYSS
GDEDYMSNGFGV
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccatggacgagcagcagaacttagggcaaggccaaggggaggaaggcgaa
cccgggacgccagttccgcctccaccgccggcggcgccagaatcgcaatctcagggaggc
gaggaggaagaagatgaggaagaggaggaggaggttaagaatgaaggcgacgaattggtt
gccaaggctcagaagcttatggacaagatcactgccgcgcctgataaccctaatcctact
gttctgcacgcccttgcctcgctccttgaaactcaagagtctcgatacatggaagagaat
ggtcattcatctagcaatggtcgggcttcacattacattggacggcttgggacctcagtc
cgggaacatgaagatttctttgaattaatatcttcaaaatacctgtcagatacaagatac
tctgttgctgtgcaagcagcttctgcaaggctgcttttaacctgttcactaacctggatt
catcctcatgtttttgaagatgctgttttggagagaataaaagattgtgtgatggatgag
acttcaatttcatcggtcgaatatcagaaatggaagcatgatttgggggggaaggaggtc
tcagattttgaaatgctgaagacctattctacaggacttcttgctgtatgtttggctggt
ggcagttcagtagtagaagatgtgttgacatctgggctgtcagccaaacttatgcgttat
cttcgtgtgcgtgttttgggggagacaagtattactcagaaggatgttactcatttagcg
gagagcaaaaataccttgggtgctatttgcataagaggtagagatgaaggtcgtgctagg
gttcggcagattttggaaacaaatcattttgatgatccaaagataacagatgagagatgt
ttagatgatcggattgttgaaggggatcatgtcagaagtatcagtaggcaaacgtttggt
gaagaacaatgggttgatggagcaaaaccacctgatggattggctgaagaggttgagatc
aatgatgctgatggaaagatgaaatctggagattttgatgaaatcgggagagatgactcc
tcaaggcgcagacccaaccgtggatgggcaagatctagagggaagggaaggaccaatgaa
ggagttgtagagaatgaacagctcttgacctctccaggatctggtagtcagttgggacat
ggacggagtgttaaagataggagttcgctaaaaaattcagatgtgaaaaaaataccggat
tctaggaagagtgcagatgttttctttttggaaagggcagataacgatgactgcttccag
gactgcagagttggatgtaaagatatttctgagctagtaaagaaagcagttagagctgca
gaagctgaagctagagcagccaatgcacctgcagaagcaatcaaagctgctggtgatgct
gctgctgaagttgtcaaaagtgcagctttagaggaattcggaactacaaataatgaagaa
gctgcagttttggccgcttcaagagcagcgtctaccgtcattgatgctgccaattcggtt
gaagtttcaaggagctctagtggcatcaatgccgaatcaatgacctcaagcagcacagaa
ccggaaaaccatgtagatactgaagaatacttcatcctggatgctgagtcccttgcacag
ttgagagaaaaatactgtattcaatgtcttgagactttaggagaatatgtcgaagttctt
ggacctgtactgcatgagaagggggtagatgtatgtcttgcattattgcaacgaaattcc
agacatagagaggcttcaaaggttgctatgcttttgcctgatgtaatgaagctcatctgt
gctttggctgctcaccggaaatttgctgccctgtttgtggataggggtggcgtacagaaa
cttcttgctgtccctagggttgctcaaaccttttttggtctttcttcttgcttatttact
attggctctctccagggaataatggagcgtgtttgtgctcttccttcagatgtggtctac
caggtggttgaattagctcttcaacttcttgagtgctcacaggatcaagccaggaaaaat
gcagccttattctttgctgctgcatttgtttttagggcagttcttgatgcttttgatgct
catgatggcttacagaaattactgggtcttttaaatgatgctgcatccgtaagatctgga
gtaaattctggggcactaggactcccaagttcaggatcacttcggaatgacaggtcacct
gcagaagtactgacttcatcagagaaacagatagcttaccacacttgtgttgctttgcgg
cagtacttcagagcacatcttattatgcttgtggattctattcgtccaaataagaacact
cgaagtgcagctcggaatcttccaagtgtaagggcaggttacaagccacttgacatcagt
aatgaagctatggatgcagtatttctgcagctacagaaggaccgaaagctgggtcctgca
tttgtgaggactccttggcctgcagtcgataagtttttgggttctaatggacatattact
atgttggagttatgccaggctccacctgttgagcgttatttacatgatttactccaatat
gcattaggtgttttgcatattgtgacattggtccctagcagccgcaagatgatcgtgaat
tcgacagtaagcagtaatcgtgttgctatagctgtcattttagatgcagcaagtgtcggt
ggtagctacgtggacgccgagatcattcaatcagcccttaatgtgttggtcaatcttgtt
tgtcctccaccatcaatcagttgtaaatcacccatacttgcacaaggtcagcagtctgcc
caaccctctactggtccttctggggaatcagttgtagcggatcgaggctccacggcagct
cctggtacacagttcaacagtagcagcacacatgctcctgttgccacaccaacttcagga
ttggtgggggatcgccgaatatctttaggagttggggcaggctgtgcaggtatggctgca
caattagagcaaggctatcgccaagctagggagtctgttcgtgccaacaatggtataaag
gttcttctgcatctcctccaaccccgattatattctcctccggcagcacttgactgtctc
cgtgcacttgcttgccgagtccttcttggtttagccagagatgatactattgcccatata
ttgacaaaactccaggttgggaagaaactatcagaactgattcgagattcaggtagccag
acgaacggaactgaacaaggcaggtggcaagctgaactttcacaggcagcgattgagctc
attgcaattgtgacgaattcgggacgagctagcacattggctgccactgatgctgctatg
ccaacattgaggcgcttagaaagggcagctatagcagctgccactcctatcacataccat
tccaaggaactactgctattaatacacgaacaccttcaggcatctgggttggccacaacg
gctgcctctctgctaaaagaggctcagttgatgcctttgccatctttggctgccccctca
tctcttgttcagcaagccacacaagaagccccttcaggacaaattcagtggccctctggt
cgaacctcaagtgggtttcttacaagcaaatcaaagattactgcaaaggatgaggaatta
aaagttgatcctactttctcatatacgaagaaaaaacctctagttttctctcctaatttt
ggtctacagtcgaagaatcagtctaatgactctcacctcacatcgcccaggaaagttttt
agtgcagcaaaacagttttctgcttctgcaaatgcatcagaaactccttcggtatccctg
ccaaaacctaccaccgatactgagtcccattgtaagacgcccattggcttgccaatgaaa
cgaaaattatctgagctgaaggatcctgggtgtttgttattgtctgggaaacgccttcac
actggcgactatggacttcggtctccggtttgtcctacacctaccacggtgcggaagagt
gccctactaactgatcctgttggattctctaccccaactgccaacttgagagatcagtat
ggtcgatcaacaccagcttgtttgccatcagattatcaggatgataaccagtatggtagt
tctagtgtcaaccttgcaacacccggctcccaatttgggcttcagagtgaccctcaacca
agcaactcagagcgattaactctagactctgtggttattcagtatttgaagcaccagcat
cgccagtgtcctgcacctataaccactcttccaccactctctcttttacacccccatgtt
tgtcctgaaccaaaacgaaacctcgatgccccatcgaatgcaacagcccggcttggcaca
cgtgagttcagaaacatatatggtggggttcacggtaatcgtaaggaccgtcagtttgtt
tacagtagattccgaccgtggcgaacttgtcgtgatgattctggtacccctttgacatgc
atttcctttcttagtgattcctctcacattgcagtaggcagccatggtggagagctcaaa
atttttgactccaatagcagcaacgtactggagagttgtgcaagccaccagtctcctgta
acgcttgttcagtcacgtctttctggtgagaccgaacttgtgctttcgtcaagcgcccag
gatgtgaggttgtgggaggcatcttcagtctctgctgggcctatgcattcctttgaaggg
tgcaaggctgcaagatttagcaattttggggatatttttgctgctctatcaacagagcct
gctcggagagagattctcctgtatgacatccaaactagccagttggaatcgaaactgtct
gacacatcttctagctctacaggtcgtggacatgtttactcacaaatacatttcaaccct
tctgacacaatgctgctttggaatggggtcctgtgggacaggcgggtttctacccctatt
catcgttttgatcagtttacggattatgggggtggtggcttccatcctgctgggaacgag
gtgattataaactccgaagtctgggatctccggaaatttagactccttagaagtgtacct
tcgttagaccaaacaacaataactttcaatgctcgtggtgatgtaatttatgcaatcctc
agaagaaatcttgacgatgtaatgtcagcagttcacacccgacgcgtaaagcatccactc
ttcgctgctttccgcacagtggacgcagttaactactctgacattgccactattccggtt
gatcgttgtgtcctcgactttgcaacagaacctacagattcgtttgttgggttgatcaca
atggacgaccaagatgacatgttagcctctgctagagtttatgaaattggtcgacgaagg
ccgaccgacgatgattccgatcccgatgatgctgagagtgaagaagaagatgaggattcc
gaagacgacgatgatggggacgtggaccccatactgggcccggatcttgatggggatgat
agtgatatggatgatatgagcaatggcgatgacgatgatagcgtgagtgacgatgatgac
gatgacgatggagatttcatcgtggatgactttgagaccggaggtggaatgctggagatt
gtgacggatggagaggaggatgacgacgacgacagtgatgggatggaatcctatagcagt
ggggatgaagattatatgagcaatggttttggtgtttaa
DBGET
integrated database retrieval system
