Pyrus x bretschneideri (Chinese white pear): 103931470
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Entry
103931470 CDS
T03446
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020
RNA polymerase
pxb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103931470
09124 Replication and repair
03420 Nucleotide excision repair
103931470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103931470
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103931470
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103931470
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103931470
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103931470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
103931470
NCBI-ProteinID:
XP_009339281
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEEEHEYDDQQYMDDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQPDFAETVCKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRMIKKGHDGEELTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLARTSSKGGSSGQYIKATLPYIKGEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVSRDKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRNLFRKLTKDV
RAYAQKCVDNGKDLNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEDAGWHDL
VAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFLRYYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAPGQTTSRYTRRDHS
ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKNQKKKGA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcacgagtacgacgatcagcagtacatggacgacgacgatgaagatgaa
atcacgcaggaggacgcgtgggccgtcatctccgcctacttcgaggagaagggcttggtg
cgccagcagctcgactcgttcgacgaattcattcagaacacaatgcaggagattgtcgac
gagtcggccgatatcgagattcggcccgagtcgcagcacaacccggggcaccagcccgat
ttcgccgagactgtatgcaagattagctttggtcagatttatttgagtaagcccatgatg
accgaatccgatggagaaactgcaaccttatttcccaaagctgcaagacttagaaatctg
acgtactcagcacccttgtatgttgatgtctcaaagaggatgataaagaaaggacacgat
ggcgaagaactcactgagacccaggatttcaccaaagtattcattgggaaggttcctata
atgcttcggtctagttattgcacgctgtaccagaattcggagaaagatttaactgagctg
ggagagtgtccatatgatcaaggtggatattttattataaatgggagtgaaaaggttctt
attgctcaagagaagatgagcaccaatcacgtctatgtgttcaagaagaggcagcctaac
aagtatgcctatgtggctgaagttcggtctatggcggagtctcaaaacaggccacccagt
accatgtttgttcggatgcttgctcggactagttctaaagggggttcttcgggacagtac
atcaaagctacccttccatatattaaaggtgaaattcctattattattgtgttccgggct
ctcgggtttgttgcggataaagatatcctagagcacatatgttatgacttctctgatact
caaatgatggagctgcttagaccttctctggaagaagcatttgtgattcagaatcaacag
gttgcattagattatattggaaagagaggtgcaaatgttggtgtaagtagagacaagaga
atcaagtatgcgaaagagattctgcaaaaggaaatgcttccacacgttggtgttggagaa
ttttgtgagacaaagaaagcttactattttggatatatcgtccacaggcttctactatgt
gcactaggacggaggccagaagatgacagggatcattatggcaacaagaggcttgatctt
gctggtcccttactcggaggcttatttcgaaatctattcaggaagttgaccaaggatgtg
agagcttatgcacagaagtgtgttgacaatggaaaggatcttaatctgcaatttgccatc
aaagctaaaaccattacgagtggcctcaaatattcacttgccactggaaactgggggcaa
gcaaatgcagctggtacaagggctggagtgtcgcaggtgttaaatcgtttgacatacgca
tccactctctcacacttgagaagactgaattctccaatagggcgtgaagggaaattggct
aaaccgcgtcagctgcataattcgcaatggggaatgatgtgcccagctgagacacctgaa
gggcaagcgtgcgggcttgtaaagaatcttgcattgatggtatacataaccgtaggatca
gctgcatatccaatcttggaatttttggaagaatggggtacagaaaactttgaggaaatt
tctcctgcggttataccccaagctacaaaaatttttgttaacggctgttgggttggaatc
catcgtgatcctgaaatgttggtgaggacattgagaaagctaaggcgacgggttgatgtc
aacactgaagttggggttgtgagagatatccgtctgaaagaattgcggatatatactgac
tatggacgttgcagtcgtccattattcattgtggacaaacagaggcttctcataaagaag
agagatattcatgcattgcagcagagggaaagccctgaagatgctggttggcatgacctt
gtagcaaagggatatattgaatatattgacactgaagaagaggagacgacaatgatttcc
atgacaattaatgatcttgtccaagcaagactcaatccggaggaggcatattcggacact
tatactcattgtgaaatccacccatcacttattttgggtgtttgtgcttctattataccg
tttcccgatcataatcagtctccacgtaatacatatcaatctgctatgggaaagcaagct
atggggatttatgtcaccaattatcagttccgaatggatacattggcatatgttttatac
taccctcagaaacctcttgtcaccacaagagccatggagcatctccacttcaggcagctt
cctgctggcatcaacgctattgttgccatctcctgttattctggttataaccaggaagat
tctgtcattatgaatcaatcctctgtggaccgtggattcttccggtcactattcttacga
tattatagggacgaggagaaaaagatggggacccttgtcaaagaggattttgggcgtcct
gacagagcaaataccatgggtatgcgacatggttcttatgacaaattggatgatgatggt
cttgctcctcctggaactagggtttctggtgaggatgtcatcataggaaagactacaccc
atggctcaggatgaggctccagggcaaactacatcacgttatacacggcgtgaccacagc
ataagtttgcgccacagtgaaaccggcatagttgatcaggttctactgacgaccaatgct
gatgggttgcggtttgttaaagtacgggtgaggtctgtcagaatacctcagattggtgat
aaatttagtagcaggcatggacagaaggggacggtgggtatgacttatacccaggaagac
atgccatggactgtggaaggggtgacccccgatataatcgtgaacccgcatgctattcct
tctcggatgacaattggtcagctcattgagtgtattatggggaaggttgcagctcatatg
ggaaaggaaggagatgctacaccttttacagatgtcacggtggacaatatcagtaaagct
cttcacagttgtgggtatcaaatgcgtggattcgagaccatgtataacggtcacacgggc
aggcggctcagcgctatgatattccttggccccacttactaccagagactgaagcatatg
gtcgacgataagatccattcacgtggacggggtccagtgcagatcctcacaaggcagcca
gctgagggacgatctcgtgatggtggtctacgcttcggggaaatggaacgagattgcatg
attgcccatggtgctgctcactttctgaaagaaagattgtttgaccagagtgatgcatat
agggttcatgtctgtgaacgttgtgggttaatagctattgcaaatctcaagaagaattcg
tttgagtgcaggggttgcaagaacaaaaccgacattgttcaggtttacattccttatgcc
tgcaagctgctgttccaagagctaatgtcgatggccatagcgccaagaatgctcacaaag
gacatcaagcctgccaaaaaccaaaagaagaaaggagcctga
DBGET
integrated database retrieval system
