Pyrus x bretschneideri (Chinese white pear): 103931489
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Entry
103931489 CDS
T03446
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103931489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103931489
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103931489
mRNA degradation factors
5'-3' decay
Decapping complex
103931489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
PEP5_VPS11_N
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Gon7
Beta-prop_EML_2
HAM1_C
Motif
Other DBs
NCBI-GeneID:
103931489
NCBI-ProteinID:
XP_009339275
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MAATGNQNPPPQQQPPPFDMQKFFKPTSPSPLSPQTSTPAHSNQNPNPNLSSSSFPIPPA
SFPPPTGPYSYPPQTAPFHHHQFQYHPHPQQPHPQMPYSPQDHHLLHQRSLSFPTPPLQP
PSNYNIGTPASNPNSTGGSNSNSSPNSGARIMALLGAPSGSLEPELSTPTGVSMVPALPM
GIPSTGPTRMPSNKLPKGRHLIGDNVVYDVDVRLQGEVQPQLEVTPITKYGSDPQLVLGR
QIAVNKSYICYGLKQGNIRVLNIHTALRSLFRAHTQRVTDMAFFAEDVHLLASVSVEGRL
FVWKISEGPDEEGTPQITGKVVIAIQVVGEGEAVHPRVCWHCHKQEVLVVGFGKRVLRID
TTKVVRGEAPSADEPLKCPVEKLIDGVQFVGKHDGEVTDLSMCQWMTTRLVSASMDGTIK
IWEDRKAQPLLVLRPYDGQPVYSATFVTAPHRPDHIILITVGPLNREVKIWSSASEEGWL
LPSDAESWKCTQTLELKSSSEPRVEEAFFNQVIALSQAGLLLLANAKKNAIYAVHLEFGS
DPASTRMDYIAEFTVTMPILSFTGTSISSHGEQIVQVYCVQTLAIQQYALELSKCLPPPL
DNVGLEKSDSNISRDAIGAEGYLSGSKPTEALLANSSPKPAVQESSSEGAAAMRYPVSAS
SVEAITSKDITTSNTESRLVSLASATSDSDAVFVASPPITLSPKLSGKFSGIRSPADSSE
AGRTLNDHGGDQQVNDYSVDRQMDAAHLNMSDVPAMDEDSRNDEPKVGQDDLSSVLNPPI
MFKHPTHLITPSEILMAASSSEAATIESKSEGEGNMQDVLANNDVGNSEVEMKVVGETRS
TQIDEFGSQGEPQKAISENKEKYFCSQASDLGIEMARECCALPAENYVTDEARQVDDASV
TEPPGQSHAGDEDQDSAKDVSVSSTPPTVLQSQTSNTKVKKQKWKNSQASGSSFPSATVL
NSIDSTNEHGVSSSLPSLEAAHPQIMAMQDTVNQLLTMQKELQKQMTMMVAGPVTKEGRR
LEAALGRSMEKTVKANNDALWARFQEENAKNEKLLRDRNQQITSLINNFINKDFPVMLEK
VVKKELSVIVPAVVRAITPAIEKAIPLAISDSFQRGVGDKAVNQLDKSVNSKLEATVSRQ
IQSQFQTSGKQALQDALKSSMEALVVPAFEKSCKVMFEQVDATFQKGMVEHTTVAQQHFD
SAHSPLALALREAINSASSVTQTLSGEVADGQRKLIALAAARGNSSAVNPMVTQLTNGPL
GGLHEKVEVPLDPKNELSRLISERKYEEAFTAALQRSDVTIVSWLCHQVDLRGILLSNPV
PLSQGVLLSLLQQLACDISNDTPRKVAWMTDVAGAINPTNQMIAMHVRPVFEQVYNILHH
QHALPTVSSAEHTSIRLLMHVINSMMMACK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccgggaatcaaaatccgccgccgcagcagcaaccgccgcccttcgacatg
cagaagttctttaaacccacaagcccatctcctctcagcccccaaacctcaacccccgcc
cattcaaaccaaaaccctaaccctaatttgagttcctcctcgttcccaatcccgcccgct
tctttccctccgcccacggggccctactcgtacccgccccaaacggcaccgtttcaccac
catcagtttcaataccacccccacccgcagcagccccacccccaaatgccttactctccg
caagaccaccacttgctccaccagaggtctctctcgtttcccaccccgcccctccaaccc
ccttctaattacaacattggcactcccgcttccaaccccaacagcaccggcggtagcaat
tccaattcaagcccgaattctggtgctcgaatcatggcgcttcttggtgctccttcggga
agtctagagcctgagttgtcgactccaacaggtgtctcaatggtgcccgctctccctatg
gggattccatccactggcccgactcgaatgcccagcaataagctgccgaaaggcaggcat
ttgattggtgataacgtggtttacgatgtggatgttaggttgcagggtgaggttcagcca
cagctcgaagttacgcccataaccaagtatggttcagatcctcagcttgtgcttggccgc
caaattgcggttaataagtcgtatatatgttatggattgaagcaggggaacattcgggtg
ttgaatatacacactgctttgagatctttgtttcgagctcatacgcagagggtcaccgac
atggctttctttgctgaggatgttcaccttttggctagtgtaagtgtagaaggacgactc
tttgtatggaagatttctgaaggtccagatgaagaaggtacgccacaaatcactggaaag
gttgtcattgctattcaggtagttggagagggagaagctgttcatccacgagtttgttgg
cactgtcataaacaagaggttttggtagttgggtttggaaagcgtgtactaagaattgat
actactaaagttgtgaggggtgaagccccttctgctgatgagcctctcaaatgtcccgtt
gaaaagctgattgatggagtccagtttgtcggtaaacatgatggagaagtgaccgatttg
tcaatgtgccaatggatgaccacccgtctggtttctgcttctatggatggaacaataaag
atctgggaagatcgcaaggctcaacctcttttagtattgagaccctatgacggccaacct
gtttattcagctacatttgtgacggctccccacaggccagatcatattatacttatcaca
gtggggccacttaatcgggaagtgaagatctggtcctcagcgagtgaagaaggctggctg
cttcccagtgatgctgaatcatggaaatgtacccagacattagagttgaagagttcttct
gaaccccgagtcgaggaggcattctttaatcaagtcatagcattgtcacaagctggcctt
ctcttacttgcaaatgctaagaagaatgctatatatgctgtacacttagaatttggttct
gatccagcatcaacccgcatggattacattgcagaatttactgttaccatgcctattttg
agttttacagggaccagtatatcttctcatggtgaacagattgttcaggtttattgtgtc
cagacactggccattcagcagtatgctttggaattatcaaagtgcttgcctccaccactg
gataatgtgggattagaaaagtcagattccaatatttcacgcgatgcaattggggctgaa
ggatatctatctggaagtaaacccacagaggcactgctagcgaattcatcacctaaacca
gccgtacaagaaagtagttctgagggtgcagctgccatgaggtaccctgtaagcgctagt
tctgttgaggcaatcacttcaaaagatattaccacttcaaatacagaatccagacttgtt
tcattggcatcggcaacgagtgactctgatgctgtttttgttgcatcaccacctattact
ttgagtcctaagttgtctgggaaattttctggtataagaagtccagcagatagctctgag
gcaggtcgcacacttaatgaccatggtggagaccaacaagtcaatgattactcagttgac
aggcaaatggacgctgctcatttaaacatgtcagatgtgcctgcaatggatgaagactcg
aggaatgatgaacctaaagttggacaagatgatttatctagtgtgctcaatccccctatc
atgttcaaacatccaacccatctaataactccctctgagattttaatggctgcttcatct
tctgaagctgctactattgaaagcaagagtgagggggagggaaatatgcaagatgttctt
gctaacaatgatgtaggtaattctgaggtggagatgaaagtagtgggtgaaacgagatct
actcaaattgatgaatttggctcgcaaggagaaccacaaaaagctatctcagaaaataaa
gaaaaatacttttgctcccaggcatcagatcttggaattgaaatggcccgagaatgctgt
gcgctaccagcagaaaattatgttacagatgaagctcggcaagttgatgatgccagcgtg
acagaaccaccaggccagtctcatgctggagacgaagaccaggactctgcaaaagatgtt
tctgtgtcatctacccccccaacagttttgcaatcgcagacatcaaatacaaaagtgaaa
aaacagaagtggaaaaattcacaagcatcaggttcatcgttcccatcagcaactgtgctc
aattcaatagattccaccaacgaacatggtgtgagttcaagcctaccctctttagaagct
gcacaccctcaaattatggccatgcaggatacggttaatcagctactgaccatgcagaaa
gaactgcaaaagcagatgacaatgatggttgcaggccctgttacaaaggaagggaggaga
ttggaagctgctcttgggcgaagtatggagaagactgtaaaggccaataatgacgctcta
tgggctcgttttcaagaagagaatgcaaagaacgagaagttattgcgagaccgtaatcag
caaataaccagtttgatcaataacttcataaacaaggacttcccagtcatgttggagaag
gtggtgaagaaggaattatctgtgattgtaccagctgttgttcgtgctataactccagcg
attgagaaggccatacctttggctatttctgattccttccagagaggagtgggtgacaag
gctgttaatcagttggataaatctgttaactcaaaacttgaagctactgtttccaggcaa
attcagtcacagtttcaaacttctggcaaacaagctcttcaggatgctctcaagtctagt
atggaagctttggtagtacctgcctttgagaagtcatgtaaggtcatgtttgagcaagta
gatgctacgttccagaaaggaatggttgaacacacaactgtggcccagcagcactttgac
tctgcacattcgccattggcactggctctaagggaagctattaattctgcatcatcggtt
actcaaaccttaagcggagaagtggctgatggtcaacgtaagctcatagctcttgcagct
gcacggggaaactcaagtgcagtaaatcctatggtcacacaactcactaatggacctttg
ggtggtctccacgagaaggttgaggtgcctttggatccaaagaatgagctatcgaggctg
atatctgaacgcaagtacgaggaggctttcacagcagctctgcaaagaagtgatgtgacc
atcgtatcgtggttatgccatcaggttgatctgcgtgggatattgctgtcgaatcctgtt
cccctgagccaaggtgtgcttctctctcttttgcaacaactggcctgtgatatcagcaat
gatacacccagaaaagttgcgtggatgacggatgtggcgggtgccataaacccgactaac
caaatgattgcgatgcacgtacggcctgtatttgagcaagtttacaatatactgcaccat
caacatgccttgcctacggtctctagtgccgaacacactagtatccgacttctcatgcat
gtcatcaattccatgatgatggcctgtaagtga
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integrated database retrieval system
