Pyrus x bretschneideri (Chinese white pear): 103931655
Help
Entry
103931655 CDS
T03446
Name
(RefSeq) ABC transporter A family member 1-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103931655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pxb02000
]
103931655
Transporters [BR:
pxb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103931655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
103931655
NCBI-ProteinID:
XP_009339450
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MGTGRRQLKIMLWKNWLLKVRHPFVTCAEILLPTVVMLLLIAVRMRVDTQIHPAQPYIRN
GMFVEVGKGMSPNFEQVLELLLNKEEFLAFAPDTEETRSMINIMSVKFPLLKHVSRVYKD
EQELETYIRSDLYGTCNQILNCSNPKIKGAVVFHDQGPHSFDYSIRLNHTWAFSGFPDVK
SIMDTNGPYLNDLELGVNAVPTMQYSASGFLTLQQVLDSFIIFAAQQSDTKDIELPSSLS
FGEPSFLNVPWMHYSPSNIRIVPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISRLISY
SVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSAIITVSTMDNLFKYSDKSVVF
IYFFFFGLSAIMLSFLISTCFTRAKTAVAVGTLAFLGAFFPYYSVNDEAVPMILKVVASL
LSPTAFALGSINFADYERAHVGLRWSNIWRASSEVNFLVCLLMMLLDALLYCLIGLYLDK
VLPRENGIRYPWNFIFQKCFWKNPSIKELHNHNSSLEVNSHDKDCKKASFSGKDNARASV
EAITFDMKQQELDHRCIQIRNLHKVYASKKGKCCAVNSLELTMYENQILALLGHNGAGKS
TTISMLVGLLRPTSGDALVFGKNIVTDMDEIRKELGVCPQNDILFPELTVREHLEIFAIL
KGVQEDLLNGAVVDMVDQVGLADKMNTAVRALSGGMKRKLSLGIALIGNSKVIILDEPTS
GMDPYSMRLTWQLIKKIRKGRIVLLTTHSMDEAEVLGDRIAIMANGSLKCCGSSLFLKRQ
YGVGYTLTLVKSTPTACVASDIVYRHIPSATCVSEVGTEISFKLPLASASSFERMFREIE
NCMNRSTSNSETSSGEEKDYLGIESYGISVTTLEEVFLRVAGCDYAEATSFEQKTGQRCL
DSLISQSSHDSAPKKISESKKSFGYYKEILGFLFRIVGRACGLVVATVLSFLNFVGGHCC
SCCFISRSTFWRHSKALLTKRAISARRDRKTIVFQLVIPAVFLFFGLLFLKLKPHPDQQS
VTFTTSHFNPLLRGGGGGGPIPFNLSLPIAKEVAHYVKGGWIQEFRPSAYRFPNSDKILD
DAVEAAGPTLGPVLLSMSEFLMSSFNESYQSRYGAVLMDDQNDDGSLGYTVLHNSSCQHA
APTFINLMNAAILRLAARNKNMTIQTRNHPLPMTNSQHLQRHDLDAFSAAVIVSIAFSFI
PASFAVPIVKEREVKAKHQQLISGVSILSYWASTFIWDFISFLFPSSFAIILFYIFGLEQ
FIGSGYLLSTVVMFLAYGLAIASSTYCLTFFFSDHSMAQNVVLLVHFFTGLILMVISFIM
GLIKTTASANSFLKNFFRLSPGFCFADGLASLALLRQDMKDKSSNQALDWNVTGGSICYL
GIESVCYFLLTLGLELLLSNKWTLATLKECWNNIRSIEHGTPSYLEPLLKSSSDVTLDLD
EDIDVKTERTRVLSGSIDNAIIYLRNLWKVFPGGKHHSAKIAVHSLTFSVQEGECFGFLG
TNGAGKTTTLSMLTGEESPTDGTAYIFGRDICSNPKAARRHIGFCPQFDALLEFLTVKEH
LELYATIKGVPDHRLDDVVMEKLMEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIV
ILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRC
IGSPQHLKTRFGNHLELEVKPFEVSSVDLQNLCRVIQEWLSSVPSHPRSLLDGLEVCIGA
DSILAENATVAEISLSREMIIMIGRWLGNDERIKTLISPLPISDGVIGEQLIEQLVRDGG
IPLPIFSEWWLSNEKFSAIDSFVLTSFPGAIFQGFNGLSAKYQLPYGQGLSLADVFGHLE
RNRNQLGIAEYSISQSTLETIFNHFAANS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggacggaggcagttgaagattatgctatggaagaattggcttctcaaagtt
cgtcaccctttcgtcacctgcgctgagatattacttcctacagtggtgatgttgttgtta
atagctgtgaggatgcgtgttgatacacagattcatccagcgcagccgtatatccggaat
gggatgtttgtggaagtgggcaaaggaatgtcacctaattttgaacaagtattggaatta
ctgttgaataaggaagagtttctggcttttgcaccagatacggaagaaacaaggtcaatg
attaacataatgtcggttaaatttcccctcttgaagcatgtttctagagtttacaaagat
gaacaggagctagaaacctacatacgctcagatctctatggtacctgcaatcaaatcttg
aattgctcgaatccaaaaatcaaaggagcagttgtatttcatgatcaaggtcctcattca
tttgattatagcatacgtcttaatcacacatgggctttctcgggatttcctgatgtcaaa
tccatcatggacacgaatggcccctacctaaatgacttggaacttggtgtaaatgctgtt
ccgaccatgcaatacagcgctagtggatttttaactctccagcaagtactggattcattt
attatttttgcggcccaacaatctgacaccaaagacatagaacttccttcatcgctgtcc
tttggtgaaccttcctttctaaacgttccatggatgcattacagcccatcaaacattcga
atagtcccgtttccaactcgtgaatacactgatgatgagttccagtccatcataaaaagt
gtgatgggtgtattgtatcttctaggattcctctacccaatttctcggctgatcagctat
tcggtgtttgagaaggaacagaagataaaagaaggtctttatatgatgggtctaaaagat
gggatattccatctctcatggttcattacatatgctttgcagttcgctatttcttctgca
atcattacagtttccactatggataaccttttcaaatatagtgataagtcagttgtgttc
atttacttcttcttcttcggactgagcgcgattatgctgtcatttttaatctcgacatgc
ttcacacgagcaaagacagctgttgctgttgggacccttgcttttctgggtgcttttttc
ccttactactctgtcaatgatgaggctgtccctatgatattaaaggttgttgcttctctg
ctttcgcccacggcatttgctctagggtcaattaactttgctgattatgagcgtgctcat
gttggccttcgttggagcaacatatggcgggcatcgtctgaagtgaattttctggtctgt
ctactgatgatgttgcttgatgcattgctctactgtttaattggtctttatctggacaag
gtccttccgagggagaatggaattagatatccatggaacttcatttttcagaagtgcttc
tggaaaaatccaagcattaaggaacttcataatcacaattccagtctagaagttaatagc
catgacaaggactgcaagaaggcaagtttttctgggaaagataatgccagagcatctgtg
gaagcgataacctttgacatgaaacaacaagagcttgaccatagatgcatccaaataaga
aatctgcataaggtttatgccagtaaaaaggggaaatgctgtgctgttaactcattagag
ctcaccatgtatgaaaatcagattcttgctcttctaggacacaacggggctggtaaaagc
acaacgatatcaatgcttgttggccttcttcgccctacttcaggggatgctttggttttc
gggaagaatattgttacagacatggatgagatacgaaaggaattgggggtgtgtcctcaa
aatgatatcctttttccagaattgacagtgagggaacatttggaaatatttgctatactg
aaaggtgtgcaggaagatcttctgaatggcgctgttgttgatatggttgatcaagtaggt
ttggctgataaaatgaacactgctgtgagggctctatctggaggcatgaagaggaagttg
tctcttggaattgcactgataggaaacagtaaggttataattttggatgaacctactagt
ggaatggatccatactccatgcgcttgacatggcagctaataaaaaaaatcagaaaggga
aggatagtgttactgacaacgcactcaatggatgaagctgaagtacttggagatcgtata
gccatcatggctaatggttccttgaaatgttgcggaagttcccttttcttgaagcgtcag
tacggggttggttatactttaaccttggtgaaatcgacacctactgcctgtgtagcttct
gacattgtttaccgccatatcccatcagcaacatgtgtaagcgaggtaggaacggagatt
tccttcaagcttcctttggcatccgcatcatcctttgaacgtatgtttagggaaattgag
aattgcatgaaccgatctacgtcaaactcagaaacaagttctggcgaggagaaggactat
ttgggcattgaaagttatggaatatctgtaacaactttggaggaggtattcttgagggtt
gcaggatgcgactatgctgaagctactagttttgaacagaagactggtcaacggtgtctt
gattctttgatttcacagtcttctcatgattctgctcccaaaaagatctctgagtcaaaa
aaatcctttggatattataaagagattcttgggttcttatttagaatagtgggaagagcc
tgtggtttggttgtcgctacagttttaagtttcttaaactttgttggtggtcattgctgt
agctgttgtttcatttcgaggtcaactttttggcgacattctaaagcattgctcacaaag
agggcgatatctgctcgcagagaccggaaaacaattgttttccagcttgttattcctgca
gttttcttattttttggtcttctgtttctcaagctcaagccacatcctgatcagcagtct
gttacatttacaacttcacattttaatccactattgcgaggtggtggtggtggtggtcca
atcccttttaatctgtccttgcctattgcaaaggaggttgcacactatgttaaagggggt
tggatacaagaattcagacctagtgcatatagattccctaattcagataagatattggat
gatgcagttgaggcagcggggccaaccctgggacctgttttactttcaatgagcgaattt
ttaatgtctagctttaacgaatcttaccagtcaaggtatggggcagttttgatggatgat
cagaatgatgatggaagtttagggtacactgtgctacacaacagttcctgtcagcatgct
gccccaacctttatcaatttaatgaatgctgcaattcttaggcttgctgctcgtaataag
aatatgacaatccaaacgcgtaatcaccctctgccaatgacaaatagccaacatctgcaa
cgtcatgatttggatgcattctcagctgcagttattgttagtattgcattttcattcatt
cctgcatcatttgccgttcctattgtgaaggagcgtgaagtaaaagccaaacaccaacaa
ctgattagtggggtttctattctttcatattgggcttctactttcatatgggacttcatc
agcttcctttttccttcatcgtttgcaataattcttttttacatatttggtctggagcag
ttcattggaagcggatatttattgtcaacagttgtcatgtttttagcgtatggattggca
atcgcatcatccacatattgccttacatttttcttctctgaccacagtatggctcagaac
gtggttctcttggtccacttctttacgggactcattcttatggttatctcattcatcatg
gggcttataaagacaacagcaagtgcaaattcttttcttaagaactttttcagattatct
ccagggttttgctttgctgatggacttgcgtcactggctcttctccggcaagatatgaaa
gataaatctagcaatcaggcccttgattggaacgttactggtggctcaatttgttatctt
ggtattgagagcgtttgttacttccttttgacacttgggcttgaactcttactttctaac
aagtggacactagccacactgaaggaatgttggaacaacattagaagcatcgaacatggc
accccaagttatctagaaccccttctgaagagttcctcagatgttacgcttgaccttgat
gaagatatcgatgtaaagacagagagaactagggtgctttcaggttccattgacaatgcc
ataatttatttgcggaatctttggaaggtgtttccaggaggaaagcatcatagtgcaaaa
atcgcggtacattcattgactttctcagttcaggaaggagagtgttttggttttttagga
acaaatggagctggaaagaccacaactctgtcaatgctgactggagaggaatctccaact
gatgggactgcttatatatttggaagggatatatgctctaatccaaaggctgctcgtcga
catatcggattttgcccacagtttgatgctttgttggaattcttaactgttaaagagcat
cttgagctttatgccacaataaaaggagtaccagatcaccggttggatgatgttgtaatg
gaaaagttaatggagtttgacttgttaaagcatgccaacaaaccatcattttctctcagt
gggggaaacaagcgtaaattatctgtcgcaattgcgatgattggagatcctcctatagtc
attcttgatgaaccgtcaacaggtatggatccaattgccaaaagattcatgtgggaagtg
atatctcgtctatcaaccagacgaggaaagacagcagtaatacttactacgcatagcatg
aatgaagctcaagcactttgcactcgtatggggatcatggttggaggccgattaagatgc
attggtagtccccagcatttgaaaactcgatttggaaatcatcttgagctagaggttaaa
ccttttgaagtcagctctgtggacttacaaaatctgtgccgagttattcaagaatggctg
tcatctgttccatcccatcccaggagcttacttgatggccttgaagtatgcattggggca
gactccattctggctgaaaatgccacagtggcagagattagcttgtcgcgagaaatgata
attatgattggacgatggcttggcaatgatgaaagaataaagacactaatatctccgctg
ccaatttctgatggggtgattggtgaacagttaattgagcagttggttcgagatgggggt
ataccattgccaatattttctgagtggtggttgtccaatgagaagttttcagcaattgat
tcatttgtcctcacatcattccctggtgcaatattccaggggtttaatggcttgagtgct
aaataccagttgccatatggacagggcctctcgcttgcagatgtctttgggcaccttgaa
cggaacagaaatcaacttggcattgcggaatacagtattagccagtccactcttgaaact
atattcaaccattttgcggctaactcgtga
DBGET
integrated database retrieval system
