Pyrus x bretschneideri (Chinese white pear): 103931992
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Entry
103931992 CDS
T03446
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103931992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103931992
03036 Chromosome and associated proteins [BR:
pxb03036
]
103931992
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103931992
Coactivators
SAGA/TFTC/STAGA complex
103931992
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103931992
STAGA complex
103931992
TFTC complex
103931992
SAGA complex
103931992
SLIK complex
103931992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
103931992
NCBI-ProteinID:
XP_009339800
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAENCPSSSPNPLQPSIDPAAAVASPSNVMITQNPANSSANPAIPSSSTLSQSPQIASPP
LPSLSNVSLPQTQHISPPVGLDYAQKSTQQQQQLQQQSQSLVQQSQNVNVNSMPNYQLQQ
SMQSMQRTPSMSRMNQLQQMSQNPQQQQQHFGMMRQQGGLYGQLNFGGSGGIQQQNQQQQ
QQNQAQQTQQLGGGNLSRSTLIGQSGHLPMLSGPAAIAAAQLNLQPQLLASPRQKGSLVQ
GSQFHHSNSPGQSLQGTQAMGVMGSINLSSQLRANGAIASFAQQRINQGQGQLRQQLAQQ
SSLTSAQVQSLPRTSSLAFMNPQLSGVSQNGQPAMMQNSLSQQWLKQMPAIPGPGSPSPS
SSLRLQQHRQQVLYQQQLASNQLQKSMPFIPQQLNQLVQQQQQMGHPQLQQQPHQQQQQL
QQQPLQQQSQQQQLSSPRMAVPAGQKSLSLTGSHPDATASGTTTPGGSSSQGTEATNQLL
GKRKIQDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLL
HLEKNWHLTIPGFSSEERKCQNKSLSSDLHKKRLDVIRTLMESSNLETNPNTPKEMIRGF
GNPVGTNHLIRPSVGAEQLVSQSTGSQMLQQMTRF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaactgcccatcgtcgtccccaaaccccctccaacccagcattgacccagca
gcagcagtagcatcaccctcaaacgttatgatcacccaaaacccagcaaactcttccgca
aacccagcaatcccatcctcttcaactctctcccagtctccacaaatcgcatccccacct
ctcccttccctgtccaacgtctcgcttcctcaaacccagcacatttcgccccccgtcgga
ttggattacgcacagaaatcgacccagcagcagcaacagctgcaacagcaatctcaatca
ttggtgcaacaatcccagaacgtgaatgtgaattccatgccgaattaccagctccagcag
agtatgcagagtatgcagaggacgccgtcgatgtcccgaatgaaccagcttcagcagatg
agccagaacccgcagcagcaacagcagcatttcggtatgatgaggcagcaagggggtttg
tatgggcagttgaattttggtggctctggtggtatccaacagcagaatcagcagcagcaa
cagcaaaaccaggcacagcagactcagcaacttggcggtgggaacttgtcgcgatcaacc
ttgatcgggcagagtggccacctgcccatgttgtctggccctgctgctattgcagctgcg
caattgaatctgcagccgcagttgttggcctcgccgagacaaaaaggcagcctggtccaa
ggttcccaatttcatcacagtaattctcctgggcaatctttacaaggaacacaggcaatg
ggggtgatgggatccatcaatttgagctcgcaactaagagctaatggggccattgcttct
tttgctcaacagagaataaatcaggggcagggccaacttaggcaacagttggcccaacaa
agttcgctcacctctgcacaggttcagagcttgccaagaacatcttcacttgcttttatg
aaccctcagttatctggtgtgtctcagaatggacagccagcaatgatgcagaattcttta
tcacaacagtggttgaagcaaatgccagcaattcctggccctggttcaccttcaccttca
tcttcgttgcgtcttcaacaacataggcagcaggttctctatcagcagcaactggcttct
aatcagttgcaaaagtctatgccctttatccctcaacagttaaaccagcttgtacagcag
cagcaacaaatgggacatccacagctgcagcagcagccgcatcaacagcaacagcaactt
cagcagcaaccactacaacaacaatcgcagcagcaacagctgagttccccaaggatggct
gtacccgcaggccagaaatctcttagtttaacaggatcacaccctgatgctactgcatct
ggtactaccacacctggagggagttcaagccaaggaacagaagcaactaaccaacttctc
gggaagagaaagatacaagatttagtctcacaggttgattcacaaggcaggctggatcct
gaagttgaagatcttctcttggagattgctgatgacttcattgattctgtgacaacatat
gcatgcaatttggcaaagcatagaaaatcttcaactttagagtccaaggatgtgttgcta
catctagagaaaaattggcatctgacaattcccgggttttcaagtgaggagaggaagtgc
caaaacaaatctttgtcaagtgatctccataagaagcgtttggatgtgatacggacgctg
atggaatcgtcgaacctggaaacaaatcccaatactcctaaagagatgatcagggggttt
ggcaatccagttggtaccaaccacttgattagaccatctgttggtgcagaacagttggtt
tcacagtcaactggttctcaaatgctgcagcaaatgactcggttttaa
DBGET
integrated database retrieval system
