Pyrus x bretschneideri (Chinese white pear): 103932168
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Entry
103932168 CDS
T03446
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103932168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103932168
Enzymes [BR:
pxb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
103932168
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
90S particles
Other 90S particles
103932168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
103932168
NCBI-ProteinID:
XP_009339993
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MVRPYAVKGKKRKKNADVYDRAEEEDVAVAAAAAAEPEEPEAEEADKKRIKGNESEEKEG
NPIELDGITLAPAEINPNNGPGAIFILEKASLEVAKVGKTYQLLNSDDHSNFLRKNNKDP
ALYRPDIVHQALLMVLDSPINKAGRLRNVYVRTAAGVLIEVKPYVRIPRTFKRFSGVMLQ
LLQKLSISAVGKREKLMRVIKNPVTQYLPVNSRKIGFSYSSEKLVNIQNYVASAENSTDF
VFVVGAMAHGKVETDYNEDFISVCGYPLSAAYCITMICQALAGKWTVL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccatatgcagtgaagggaaagaagcggaagaagaatgcagatgtatacgac
agagcagaggaagaagatgtagcagtagcagcagcagcagcagctgaaccagaagaacca
gaggcagaggaagccgataagaaacggatcaaaggaaatgaatcagaagaaaaggagggc
aacccaattgagctcgacggtattacattggccccagcagagattaaccccaacaacgga
cctggtgctatcttcatccttgagaaagcttctctggaagttgccaaagttggaaagact
tatcagctattgaattctgacgaccactcaaatttcctgaggaagaacaacaaggatcct
gctctttacaggcctgatatcgttcatcaggctctccttatggttttagatagcccaatt
aataaagctgggaggttgcgaaacgtgtatgtgagaactgcagcaggtgttcttattgaa
gttaagccatacgttcgtatccccaggacatttaagcggttctctggtgtgatgttgcag
ctgctacaaaaactgagtatatctgctgttggtaagcgtgagaaacttatgcgtgtgata
aagaaccctgtgacacagtatttacccgtcaactctcgtaaaataggcttctcatacagt
tcggaaaaattggttaacatacagaattatgttgctagtgctgaaaacagtacggacttt
gtttttgtggttggtgcgatggctcacgggaaagttgagacagactataatgaggatttc
atttcagtatgtggttatccactgagcgcggcatattgtatcacaatgatttgccaggcg
ttggctggaaagtggactgttttgtga
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