Pyrus x bretschneideri (Chinese white pear): 103932544
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Entry
103932544 CDS
T03446
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
pxb03440
Homologous recombination
pxb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103932544
03420 Nucleotide excision repair
103932544
03430 Mismatch repair
103932544
03440 Homologous recombination
103932544
03460 Fanconi anemia pathway
103932544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxb03000
]
103932544
03032 DNA replication proteins [BR:
pxb03032
]
103932544
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103932544
Transcription factors [BR:
pxb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103932544
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103932544
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103932544
MMR (mismatch excision repair)
103932544
DSBR (double strand breaks repair)
HR (homologous recombination)
103932544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF936
DacZ_A
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
103932544
NCBI-ProteinID:
XP_009340443
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MPVNLTPNAIAAVIGGDLNLKPLVQVIDIKLIGTQERYRFMVSDGVSSQHAMISSQLNDR
IKTNRVQIGSVVQLTEYICTVLQNRQVIVVLNMETIILNCDIIGNPKPYGAPNSDAPNAL
PNGSFQQSASNHMTLQNPIHNGQNIRPTFHSERPNVRPRLHPESSAHNAPNIRTTVQPPY
QPPPHYKNRGPIMKNDAPARIIPINALNPYQGRWAIKARVTAKGDPRRYNNAKGDGKVFS
FDLLDSEGGEIRVTCFNAVLDRFYDIIEVGRVYLISKGSLKPAQKNFNHLKNDWEITLDA
SSTVDLCPDEDGSIPAQNFDFRPISEIENAESNSIVDVIGIVISVNPSVPIMRKNGMETQ
RRILNLKDWSGKSVELTLWGDVCNREGQKLEEMLASGFSPVLAVKAGKINDFSGKSVGTI
HSTQLFINPEISDALTLRDWFDRGGKDTASVSISKDFVPGGTKNEIRKTISQIKDEGLGR
SDKPDWVTVMATISFIKTDSFCYTACPLMIGDRQCNKKVSRSGNRGWQCDRCNQEFEECD
YRYLLQAQIQDHTGLTWATAFQETGEEILGCSAKELYLLKYEEQDDSRFGDIVRSSIFNQ
FLFKLKIKEETYGDEQRVKITIVKADKVNYSSDSRYMLDMISKYSR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgaacctgacgccgaacgccatcgcggcggtgataggcggcgacttgaatttg
aagccgttggtgcaggtgatcgatattaagctcatcggcacgcaggagaggtaccgattc
atggtctccgacggcgtttcgtctcagcatgccatgatctcttcgcagctcaacgaccga
atcaagaccaaccgtgtccaaataggttccgtcgtccagctcaccgagtacatttgcacc
gtactccagaaccgccaggttattgttgtgctgaacatggaaactatcatactgaactgt
gacattattgggaatccaaaaccatatggtgcacctaattcagatgctccaaatgcattg
cctaatggcagttttcagcagtcagccagtaatcatatgactttgcaaaatcctattcac
aatgggcagaatatcagacctacttttcattccgagaggccgaatgtcagacctcgtctt
catcctgaaagctctgcacacaatgcaccaaatattcgaactactgttcaacctccttac
caaccacctccacattacaaaaatcgtggtccaatcatgaagaatgatgcaccagcacgg
atcattcccattaacgctctgaatccttatcagggaagatgggctatcaaggcaagggtc
acagcaaaaggggacccccgtcggtataataatgctaaaggagacggtaaagttttctct
ttcgacctgcttgactctgaaggaggggaaataagagttacctgcttcaatgctgttctt
gaccgcttctatgatattattgaggttggcagagtttacttgatttcaaagggaagcttg
aaacctgcacagaagaatttcaaccatctgaagaatgactgggagataactttggatgca
agttcaactgtggacctctgccctgatgaagatggttccataccagcgcaaaactttgac
ttcaggccgattagtgaaattgaaaatgctgaaagtaattcgattgttgatgttattggt
attgtgatatctgtcaatccttctgttcctatcatgaggaagaacggtatggaaactcag
agaagaattctgaatctaaaggattggtcgggcaagagcgttgagctaaccctttgggga
gatgtctgcaacagggaaggtcaaaagcttgaagagatgttggcttctgggttttcccca
gttttagctgttaaagctgggaagattaatgatttcagtgggaagtccgttggaacaatt
cattctacacaactatttataaacccagaaatttctgatgctcttaccttgagagactgg
tttgaccgagggggcaaggatactgcttctgtctccatttctaaagactttgttccagga
ggaactaagaatgagatacgcaaaaccatttctcagattaaggatgaaggtcttggaaga
tcagataagccagactgggtcactgtgatggcgacaatatctttcattaagacagattct
ttctgttacacagcctgtcccttgatgattggagataggcagtgcaataaaaaggtgtcg
aggtcaggaaacagaggatggcagtgtgacaggtgcaatcaagaattcgaggagtgtgat
tatcggtatcttcttcaggcccaaattcaagaccatactggattgacttgggcaacggct
tttcaggaaactggggaagagatcttgggttgctcagcaaaggagctgtacttgttgaag
tacgaagagcaggatgattcaagatttggagacatagtccggagcagtatctttaaccag
tttctgttcaagcttaaaatcaaagaggagacgtatggcgatgagcagagggtgaagatc
accatagtgaaggcggataaggtgaactattcttcagacagcagatacatgcttgatatg
atttcgaaatattctaggtaa
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integrated database retrieval system
