Pyrus x bretschneideri (Chinese white pear): 103933110
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Entry
103933110 CDS
T03446
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
pxb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103933110
03083 Polycomb repressive complex
103933110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103933110
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103933110
Histone modification proteins
HAT complexes
HATB complex
103933110
HDAC complexes
Sin3A-HDAC complex
103933110
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103933110
PRC2.2
103933110
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103933110
Heterochromatin formation proteins
Other heterochromatin formation proteins
103933110
Chromatin remodeling factors
NuRD complex
103933110
NuRF complex
103933110
NuRF complex (fruit fly)
103933110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
103933110
NCBI-ProteinID:
XP_009341034
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MKGKATEASVNDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKSRQRLFLS
EQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELP
QNSKIVATHTDSPDVLIWDIEAQPNRHAVLGASDSRPDLLLTGHQDNAEFALAMCPSEPF
VLSGGKDKSVILWSIHDHISSLASEPGSGGGSAKHSSKIGGSNDKLRDSPSVEPRGVYKG
HEDTVEDVQFCPSSAQEFCSVGDDSCLILWDTRAGSSPAVKVDKAHDADLHCVDWNPHEV
NLILTGSADNTIRLFDRRYLTSGGVGSPVHTFEGHNAAVLCVQWSPHKASVFGSSAEDGL
LNIWDHEKVGKNGSKPSNAPPGLFFRHAGHRDKVVDFHWNASDPWTIASVSDDCGSTGGG
GTLQIWRMIDLIYRPEEEVLAELDTFKSHLTTCQA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaaagctacggaggcgtcggtgaacgatcgatacacgcagtggaagtcgctg
gtgccagtgctctacgactggctcgccaatcacaaccttgtttggccttctctctcttgc
agatggggaccgcagctggagcaagccacttacaagagtcgtcagcgcctttttctttcg
gaacagactgatggcagtgtgccaaatacacttgtcattgcaaactgtgaagttgtcaaa
cccagggttgcagctgccgagcacatatcacagttcaatgaagaagcacgctctcccttt
gtgaaaaagtataaaactattatacatcccggtgaggtgaacagaatcagggaactccct
cagaatagtaagatagtggcaacacacactgacagtcctgatgttctcatttgggatatt
gaggctcaacctaatcgccatgctgttctgggagcttcagattctcgtccagatctgcta
ttgacagggcatcaagataatgctgaatttgctcttgccatgtgcccatctgaacccttt
gtgctctctggagggaaggataaatcagtgattttgtggagtattcatgatcatatctca
tctttagcatcagaaccaggatctggaggtggcagtgctaaacattcttctaagattggt
gggagtaacgataaactcagagacagcccttctgttgagccacggggcgtctataaaggg
catgaggatactgttgaggatgtgcagttctgcccatctagtgcacaggagttctgtagt
gtaggtgatgattcttgcctcatactatgggatacaagagctggatctagtccagctgtc
aaggttgacaaagctcatgatgctgaccttcattgcgttgattggaatccacatgaagtc
aatctcatacttacagggtctgccgataatactattcgcttgtttgaccgccgatatctc
acttctggaggagttggatcacctgttcatacatttgagggccacaatgcagctgtcctc
tgcgtacagtggtctcctcacaaggcatctgtttttggaagctctgccgaggatggctta
ctaaacatctgggatcatgaaaaggttggcaagaatggatcaaagccgtcaaatgctcct
ccaggattgttctttcgacatgctggtcatagggacaaggttgttgactttcattggaat
gcatctgatccgtggacgatagctagtgtctctgatgattgcggaagtaccggaggtggt
ggtaccctccagatatggcggatgattgatttgatttacaggcccgaggaagaggtcctc
gcggagctggatacgttcaaatctcacctaacaacatgccaggcgtga
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