Pyrus x bretschneideri (Chinese white pear): 103933387
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Entry
103933387 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103933387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103933387
03036 Chromosome and associated proteins [BR:
pxb03036
]
103933387
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103933387
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103933387
PBAF complex
103933387
GBAF(ncBAF) complex
103933387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
103933387
NCBI-ProteinID:
XP_018499544
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MPASPSDSRGKWRKRKRDPQIRRNKREDDEDDDADDNELDPNDDSEDPQHNPQSAPAPDP
APHETEVLDGGVRVSDFPPVVLRTVNRPHSSVFALVALERANHCDAKGPASPIVLENVSY
GQLQALSGVPADSPALDPDRADGSGAAYVVIPPSIMEGRGVVKRYGNRVHVVPMHADWFS
PATVHRLERQVVPHFFSGKSSDHTPELYMHCRNEIVAKYMENPEKRLAFSDFQQLLGRLS
TEDLTRIIRFLDHWGIINYCAEAPSHEPCNGSSYLREEVNGEIQVPSAALKSIDSLIKFD
KPRCRLKAAEVYLSLPCHGDDDVPDLDNTIRKRLSENHCNYCSSSLPSVYYQSQKEVDVL
LCSNCFHEGRYVVGHSSIDFVRMDSTKDYGDLDGESWTDQETLLLLEAMEIHNENWNEIA
EYVGSKSKAQCILHFLRLPVEDGLLENIEVPGVSLSSNSSDRDGRGGFHSSSNGDAAGSF
LQDADSDSRFPFANSGNPVMALVSFLASSVGPRVAASCAHAALTVFSEDNGVSASASIME
GSGQRINPESIHGTEGGTYRNSANSIPQKEKNSAGHGSWGQNEAGVVPIPTEKVKAAAKA
GLAAAAIKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQVEKTR
QRMVSERARIMSTQFGPAGASPMSLGGVGSSMSNNNIGNNRQQIMSPSASQTSISGYSNN
QSVNPHMPFVPRQSMLGLGPRMPLTSIQPSSSAQNAMFNATGAAQPTLNHPMLRPVPGTS
SGLG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttctccttcagactcccgcggcaaatggaggaagcggaagcgcgacccccaa
attcgccggaacaagcgcgaggacgacgaagacgacgacgccgacgacaacgagctcgac
ccgaacgacgactcggaggacccccaacataacccccaatccgctcccgcacccgatccc
gcccctcacgagaccgaggtcctcgacggtggggtccgcgtaagcgacttccctcccgtc
gttttgcgcaccgtcaaccggccccattcctccgtttttgccctcgtcgccctcgagcga
gccaatcattgcgatgccaaggggcccgccagtccgattgtattggagaatgtgtcgtac
ggtcagctccaggcgctgtccggcgtgcctgccgatagtccggcgttggatccggaccgt
gcagatggctccggggcggcttacgtggtcataccgccgtcgattatggagggccgtggc
gttgtgaagcgatatgggaacagagttcatgtggttccaatgcacgcagattggttttca
cctgccacagtgcatcgactggagagacaggtggtgccacattttttctcaggaaaatca
tcagatcatactcctgagctatacatgcattgtaggaatgaaattgttgccaaatacatg
gaaaatccagagaagaggcttgcattttctgatttccaacaattattaggtcgtctaagt
accgaagatttgactcgaataattcgttttcttgatcactggggaattattaattactgt
gctgaagcacccagtcatgagccgtgcaatggcagttcctacttaagggaggaggtaaat
ggtgagattcaagtgccatcagctgctctgaagtccattgatagtttaatcaaatttgac
aagcccagatgtaggcttaaggcggctgaggtttatttgtcattgccatgtcatggtgat
gatgatgtccctgatttggacaacacaattcggaagcgtctatctgaaaatcattgcaat
tactgttcttcttctcttcccagtgtatactatcagtcacagaaagaggttgatgtattg
ctgtgctctaattgcttccatgagggaagatatgttgttggtcattcaagcatagatttt
gtacggatggattcaacaaaagattatggtgatttggatggggaaagttggaccgatcaa
gaaaccctattgctgctcgaggcaatggaaatacacaatgagaactggaacgaaattgct
gagtatgtcggttcaaagtcaaaagcacaatgcatccttcattttcttcgtttgcctgtg
gaggatggcctgcttgaaaatattgaagttccgggtgtgtccctgtcttccaattcgtca
gatagagatggtcgtggaggatttcattcaagttcaaatggtgatgcagcaggatccttc
ctacaagatgctgattctgacagtaggttcccttttgcgaattctgggaatccagtcatg
gccctggtttcgtttctggcctcctctgttgggccaagagtagctgcatcttgtgcccat
gcagccttgacggtattttctgaggataatggtgtatctgcctctgcaagtataatggaa
ggatcaggccagaggataaatcctgagagtatacatggtacagaaggtggtacttataga
aattctgcaaattcaattccgcaaaaggaaaagaactcagcaggccatggttcttggggt
caaaatgaggcaggtgtggttccaatacctacagaaaaagtaaaagctgctgccaaggcc
gggcttgctgcagctgcaataaaagcaaaattgtttgctgatcacgaagaacgggaaatt
cagaggctatctgctaatatcataaatcatcagttgaagagattggagctgaagttaaag
cagtttgcagaagtggaaaccttcctaatgaaagaatgtgaacaagtggagaagacaagg
cagaggatggttagtgaacgtgcccgcattatgtcaactcagtttggacctgctggagct
tcgcccatgagtttaggaggtgttggttcttccatgtcaaataataacattggtaacaat
aggcaacagattatgtcaccttcagcttcacaaacgagcatatcaggatacagcaacaac
caatcagtcaatccccacatgccatttgtgccacgtcaatcaatgctagggttggggccg
aggatgcctttaacatccatacagccatcctcatcggctcaaaatgccatgtttaatgcc
acaggggctgcccagccgacgctaaatcatccaatgttgaggcctgtaccaggtaccagc
tccggtctaggttga
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