Pyrus x bretschneideri (Chinese white pear): 103933388
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Entry
103933388 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103933388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103933388
03036 Chromosome and associated proteins [BR:
pxb03036
]
103933388
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103933388
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103933388
PBAF complex
103933388
GBAF(ncBAF) complex
103933388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
103933388
NCBI-ProteinID:
XP_018499546
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MPASPSDSRGKWRKRKRDPQIRRNKREDDEDDDADDNELDPNDDSEDPQHNPQSAPAPDA
PDHETEVLDGGVRVSDFPPVVLRTVNRPHSSVFALVALERANHCXXXXXGPASPIVLENV
SYGQLQALSGVPADSPALDPDRADGSGAAYVVIPPSIMEGRGVVKRYGNRVHVVPMHADW
FSPATVHRLERQVVPHFFSGKSSDHTPELYMHCRNEIVAKYMENPEKRLAFSDFQQLLGR
LSTEDLTRIIRFLDHWGIINYCAEAPSHEPCNGSSYLREEVNGEIQVPSAALKSIDSLIK
FDKPRCRLKAAEVYLSLPCHGDDDVPDLDNTIRKRLSENHCNYCSSSLPSVYYQSQKEVD
VLLCSNCFHEGRYVVGHSSIDFVRMDSTKDYGDLDGESWTDQETLLLLEAMEIHNENWNE
IAEYVGSKSKAQCILHFLRLPVEDGLLENIEVPGVSLSSNSSDRDGRGGFHSSSNGDAAG
SFLQDADSDSRFPFANSGNPVMALVSFLASSVGPRVAASCAHAALTVFSEDNGVSASASI
MEGSGQRINPESIHGTEGGTYRNSANSIPQKEKNSAGHGSWGQNEAGVVPIPTEKVKAAA
KAGLAAAAIKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQVEK
TRQRMVSERARIMSTQFGPAGASPMSLGGVGSSMSNNNIGNNRQQIMSPSASQTSISGYS
NNQSVNPHMPFVPRQSMLGLGPRMPLTSIQPSSSAQNAMFNATGAAQPTLNHPMLRPVPG
TSSGLG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttctccttcagactcccgcggcaaatggaggaagcggaagcgcgacccccaa
attcgccggaacaagcgcgaggacgacgaagacgacgacgccgacgacaacgagctcgac
ccgaacgacgactcggaggacccccaacataacccccaatccgctcccgcacccgatgca
cccgatcacgagaccgaggtcctcgacggtggggtccgcgtaagcgacttccctcccgtc
gttttgcgcaccgtcaaccggccccattcctccgtttttgccctcgtcgccctcgagcga
gccaatcattgcnnnnnnnnnnnnnnggggcccgccagtccgattgtattggagaatgtg
tcgtacggtcagctccaggcgctgtccggcgtgcctgccgatagtccggcgttggatccg
gaccgtgcagatggctccggggcggcttacgtggtcataccgccgtcgattatggagggc
cgtggcgttgtgaagcgatatgggaacagagttcatgtggttccaatgcacgcagattgg
ttttcacctgccacagtgcatcgactggagagacaggtggtgccacattttttctcagga
aaatcatcagatcatactcctgagctatacatgcattgtaggaatgaaattgttgccaaa
tacatggaaaatccagagaagaggcttgcattttctgatttccaacaattattaggtcgt
ctaagtaccgaagatttgactcgaataattcgttttcttgatcactggggaattattaat
tactgtgctgaagcacccagtcatgagccgtgcaatggcagttcctacttaagggaggag
gtaaatggtgagattcaagtgccatcagctgctctgaagtccattgatagtttaatcaaa
tttgacaagcccagatgtaggcttaaggcggctgaggtttatttgtcattgccatgtcat
ggtgatgatgatgtccctgatttggacaacacaattcggaagcgtctatctgaaaatcat
tgcaattactgttcttcttctcttcccagtgtatactatcagtcacagaaagaggttgat
gtattgctgtgctctaattgcttccatgagggaagatatgttgttggtcattcaagcata
gattttgtacggatggattcaacaaaagattatggtgatttggatggggaaagttggacc
gatcaagaaaccctattgctgctcgaggcaatggaaatacacaatgagaactggaacgaa
attgctgagtatgtcggttcaaagtcaaaagcacaatgcatccttcattttcttcgtttg
cctgtggaggatggcctgcttgaaaatattgaagttccgggtgtgtccctgtcttccaat
tcgtcagatagagatggtcgtggaggatttcattcaagttcaaatggtgatgcagcagga
tccttcctacaagatgctgattctgacagtaggttcccttttgcgaattctgggaatcca
gtcatggccctggtttcgtttctggcctcctctgttgggccaagagtagctgcatcttgt
gcccatgcagccttgacggtattttctgaggataatggtgtatctgcctctgcaagtata
atggaaggatcaggccagaggataaatcctgagagtatacatggtacagaaggtggtact
tatagaaattctgcaaattcaattccgcaaaaggaaaagaactccgcaggccatggttct
tggggtcaaaatgaggcaggtgtggttccaatacctacagaaaaagtaaaagctgctgcc
aaggccgggcttgctgcagctgcaataaaagcaaaattgtttgctgatcacgaagaacgg
gaaattcagaggctatctgctaatatcataaatcatcagttgaagagattggagctgaag
ttaaagcagtttgcagaagtggaaaccttcctaatgaaagaatgtgaacaagtggagaag
acaaggcagaggatggttagtgaacgtgcccgcattatgtcaactcagtttggacctgct
ggagcttcgcccatgagtttaggaggtgttggttcttccatgtcaaataataacattggt
aacaataggcaacagattatgtcaccttcagcttcacaaacgagcatatcaggatacagc
aacaaccaatcagtcaatccccacatgccatttgtgccacgtcaatcaatgctagggttg
gggccgaggatgcctttaacatccatacagccatcctcatcggctcaaaatgccatgttt
aatgccacaggggctgcccagccgacgctaaatcatccaatgttgaggcctgtaccaggg
accagctccggtctaggttga
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