Pyrus x bretschneideri (Chinese white pear): 103933703
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Entry
103933703 CDS
T03446
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103933703
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103933703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103933703
NCBI-ProteinID:
XP_009341673
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGNSHGHHRKRRNGPGSSETANSGFKYGSPDQAAQIPSSSSTSAKKTSSSMVVALPYAHV
DSSLRALSAQAEGFGRLAIGGLHGAVYHVTTLADDGPGSLREGCRQKEPLWIVFEISGTI
HLQSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGPDVDGIQIKPNS
KHIWIDRCSLRDYEDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIDDRCIRVTIH
HCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSECNIYEAGQKKVAFKY
LTEKAADKETAMTGHIKSEGDLFVTGTQAGLSPDGGEHCVFHPTQHYQTWTKGPPVDDLK
IVLQHCTGWQCVPRPADQGLAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactcccacggccaccaccgtaaacgccgtaacggccccgggtccagtgaaacg
gccaattcgggctttaaatatggttcgccggatcaagcagctcaaatccctagctctagc
tcaacgtcagctaagaagaccagcagcagcatggtggttgccttgccgtacgctcacgtc
gactcgagcttgcgcgccctctccgcccaggccgagggcttcggccggctggcaatcggc
ggcctccacggcgccgtttaccacgtcaccactctagcagatgatggtccgggttcactt
agagaaggatgtcgtcagaaagaaccgctttggattgtctttgaaatttcaggcactatc
catctccaatcttacttgaacgtgtcatcgtataagactatagatgggcgcggtcagagg
attaaacttacagggaaagggttgaggttgaaggaatgtgaacatgtcattgtatgcaat
ttagagtttgaaggtggtagagggccagatgttgatggcattcaaataaaacccaattct
aaacacatatggatagatcgctgcagccttcgtgattatgaagacggacttatcgatatc
accagaggaagcactgatattacaatttccaggtgtcatttttcacagcatgataaaaca
atgctgattggcgcagatccctctcatattgatgacagatgcatccgggttaccattcac
cactgtttctttgatggaaccagacagaggcatcctcgtgttagatttgcgaaagtacat
ctatataacaactacacccgaaactggggcatatatgctgtttgtgctagtgtagaatct
cagatattctcggaatgcaatatatatgaagcaggacagaaaaaagtggcatttaagtac
cttacggagaaggcagcggacaaggagacggcaatgactggccacattaagtccgaaggc
gacttatttgtaacgggaactcaagcaggattatcccccgatggtggtgaacattgcgtg
tttcatcctacccagcactatcagacatggacaaaaggaccgcccgtggacgatcttaag
attgttctgcaacattgcacaggatggcagtgtgttccgcggccagctgatcaaggatta
gcgaagtag
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