Pyrus x bretschneideri (Chinese white pear): 103934089
Help
Entry
103934089 CDS
T03446
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103934089
09122 Translation
03013 Nucleocytoplasmic transport
103934089
03015 mRNA surveillance pathway
103934089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103934089
03041 Spliceosome [BR:
pxb03041
]
103934089
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103934089
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103934089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
T4bSS_IcmS
Motif
Other DBs
NCBI-GeneID:
103934089
NCBI-ProteinID:
XP_009342064
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MSYQYPILGDRPINLLKVTELKEELKKRSLTTKGLKDDLVKRLDEAIRIEGENASTQDNG
LYGDKVVEPIAVLAKTPRSTGSGGRKRTGKVDLPVQVDVNASATDLDQGGIQEGYVLVDK
DAGAIAEEELVVQSTIVETSVRVTETQVSEAAFVGDNSQNIEANKGIGNSQPLFDNEVPK
SLVENEDPKPVVENEDPKPIVENEDPKPQVEHEDPELYRKNEDPRPDLENEDPEPQLENE
NPNPQLENVDPKAQLEDEDSKPQLEKESLEPTDRDVIVNSSAPNYQVSEVSHLGFEVKYD
SISTDSVSINEKIELKDNIIADHVKLELDVNPEMVDPSSSTVVPVSGDSHPLDVEEPHQD
KASVGEKVDNNDTNADISKKNDSADVGYSEKLNLERSSGDDSMEEDVLDGKQIDSKYNSD
DVGEMCEKNDLPIVNEESHVDIVGDDISLDKMDENVEIKNHTAPPAEKRKLNDQAAVGSN
EPIKRRRWNSESLKVPELQSPIEKLTVTPKETFQTTGLKRNFSRSNSTMSEEAPKERVVP
PSQKAPTNSLRIDHFLRPFTLKAVQELLGKTGSVTDFWMDHIKTHCYVTYSSVEEALETR
NAVYNLQWPPNGGRLLAVEFVDPQEVQTRLQAFQSPAAPVGGGPVPVAATTSQPQPSPRQ
PRQQQLPPPASVPPPPPLPTAPPARERLPLPPPPPLPEKLDLPIVTLDDLFRKTKSTPRI
YYLPLSEEQVAEKLAAQQGRNTRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaatatccgattcttggcgaccgaccaatcaaccttttgaaggttacagaa
ttaaaagaggagcttaagaagcgaagtttgacaaccaagggcttgaaggatgatttggta
aaacggttggatgaagcaatacgaattgaaggggaaaatgcttcgacccaggataacgga
ctttatggtgataaagttgtagagccaattgcagttcttgctaaaacacctagaagcact
ggttctggtgggcgtaaaaggactggaaaagttgatttgccagttcaggttgatgttaat
gccagtgctacagacttggatcaagggggtattcaagaaggttatgttctggttgataaa
gatgctggtgccatagctgaagaggagctggttgttcaatcaactattgtggaaaccagt
gttagggtcactgagactcaggtgtctgaggcagcatttgttggtgataattcacagaac
attgaagctaataagggaattgggaattcacagcccctatttgacaatgaggttccaaag
tccctagtagagaatgaggatccaaagcccgtagtggagaatgaggatccaaagcccata
gtagagaatgaggatccaaagcctcaggtggagcatgaggatccagagctatatcgtaag
aatgaggatccaaggcccgacctggagaatgaggatccagagccccagctggagaatgag
aatccaaatccccagctggagaatgttgatcctaaggcccagctggaggatgaggattca
aagccccaactggagaaagagagtttagagcctacagacagggatgtcatagtcaactct
tctgctccaaactaccaggtatctgaggtcagccatttagggtttgaagtaaaatatgat
tctatttctactgattctgtgtcaattaatgaaaagattgaactaaaggataatataatt
gctgaccatgtcaaattagaattagatgttaacccggagatggtggatccatcatccagc
actgttgtcccagtcagtggtgattcacatccactggatgttgaagaaccacaccaggac
aaagcttctgttggagagaaagttgacaacaatgatacaaatgcagacataagcaagaaa
aatgatagtgctgatgtggggtactcagaaaaattaaatttagagagaagttctggagat
gattctatggaagaagatgtgctggacggtaaacaaattgattcaaagtataattctgac
gatgtgggagagatgtgtgagaaaaatgatttacccattgtgaatgaggaaagtcatgtt
gatattgtgggagatgatatttccctggacaaaatggatgaaaatgttgagatcaagaat
catacggccccacctgctgagaaaagaaagcttaatgatcaagcagcagttggaagcaat
gagccgataaaaaggcgcaggtggaactctgaaagccttaaagttccagagctgcaaagt
cctattgaaaagctgacggtcacacccaaggaaactttccagaccaccggtttaaagcgt
aacttttcgagatcaaactctactatgagtgaggaagctcccaaagaacgtgttgttcca
ccatcacagaaggctccaactaattcccttagaattgatcattttctgcgacctttcacc
ctgaaagctgtgcaagaacttctaggaaaaactgggtctgttactgatttctggatggac
cacatcaaaactcattgctatgttacttattcatcagtggaagaagccttggagacacga
aatgctgtgtataacctacagtggcctcccaatggtgggcgcctcttagcggttgagttt
gttgatcctcaggaagtgcaaacacggcttcaggcttttcagagtcctgctgcacctgtc
ggcggtggtcctgttcctgttgctgcgaccacctcacagccgcagccttctccccgtcaa
cctaggcagcagcagcttccaccacctgcttctgtccctcctccaccacccttgcctaca
gctcccccagcaagagagcggcttcctctgcctcctccaccacctctaccggagaagctt
gatcttccaattgtcaccttggatgatctctttcggaaaaccaagtcaactccccgaatc
tattacttgcctttgtcagaagaacaagtggctgaaaaacttgcagcacaacagggaaga
aatacgaggcagtag
DBGET
integrated database retrieval system
