Pyrus x bretschneideri (Chinese white pear): 103934547
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Entry
103934547 CDS
T03446
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103934547
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103934547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
103934547
NCBI-ProteinID:
XP_009342573
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MEGVPFHDGNIHDLIARRYVDVRHDANHRLQMHSSLVRRLSQERELEGHQGCVNSIAWNS
NGSLLMSGSDDTRINIWSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLSGRGTDDNAISPSAVYQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG
TSCPPAGSTNQECRNVLLDLRCGAKKSLADPPKQNFSLKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLTSCRKRTAPPPCVNYFCPMHLSERGRASLHLTHVAFSPDGEEVLLSYSG
EHIYLMNVNHAGESAMQYTSGGVLKLTSFSPILNGVELHQPASNVFRNGLPKRGNVAARF
EKCRNLIEIAERSLEEGTDYFYGIEACNEVLDGNGCDIGPTLKHDCLCIRAALLLKRQWK
NDVHMAIRDCYNARRLISSSYRAHYYMSEALSQLAKHKEALEFAIAAQSLAPSNSQVAER
LERVQGDLAAVESERNSKPNDGAHRSEPRGERVLSLSDILYRSEGNSDVSQDGPRSERED
SDYDEELELDFETSISGDEEHDIEPNIVQGSLNLRIHRRSDSAREVGGANGPSGSPSSSS
QNERIPYQPEAAIDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFVWEKRTGR
LIKMLQGDEAVVNCVQCHPVDCVVATSGIDNTIKIWTPSASVPSIVAGGAAGPENADISV
VMESNQRRLSHNRETILYSHSEILEHFRMHEFAEGSLHPFECAQS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtcccttttcacgacggcaacatccacgacttgattgcgagacgatacgtc
gacgttcggcacgatgccaatcacaggttgcagatgcactcgtcgttggtgcgaaggctt
tctcaggaaagagaattggaggggcatcaaggttgtgttaattccattgcttggaattcg
aatggctcgcttttaatgtctggatcagatgacacacggataaatatctggagctactct
agtcggaagcttttgcattctatagagactgggcacagtgcgaacatattttgtacaaaa
tttgtccctgaaacttctgatgagcttgtggtctctggagctggagatgcagaagttcga
ttatttaatttgtctcgtttaagtgggagaggaactgatgataatgctatttctccatca
gctgtgtatcaatgccatagtagaagagtaaaaaagttagctgttgaagttggaaatccc
aatgtggtatggagtgcaagtgaagatggaactttgagacagcatgacttccgagagggc
acttcttgcccacctgctggatccactaatcaagaatgtcgcaatgttttgcttgacttg
cggtgtggagcaaagaagtcacttgctgatccccccaagcaaaatttttctttaaaatct
tgtgatatcagttccactagacctcatttgctcctagttggtgggagtgatgcatttgcc
cgtttatatgatagaaggatgctgccaccactgacatcctgtcggaaacggacagcgcca
cctccttgtgttaactatttttgtccaatgcatctctccgaacgtggacgtgctagcttg
catttgactcatgttgcatttagtccagacggagaagaggttctacttagttatagtggg
gagcacatatatttgatgaatgtaaatcatgctggtgagagtgctatgcagtatacttct
ggaggtgttttgaaactaaccagcttcagtcctatactcaatggagtcgaactgcatcaa
ccagcatccaatgtattcagaaatggtcttcccaaaagaggcaacgttgctgcaaggttt
gagaagtgcaggaatctaattgaaattgctgagcggtccttggaggaggggacagattat
ttttatggcattgaagcgtgcaatgaggtgttggatggaaatggttgtgatattgggcct
acactaaagcatgattgcctttgtattcgtgcggcattgttgcttaagcgccagtggaaa
aatgatgttcatatggctataagagattgttataatgctcggaggctcattagctcctct
tacagagctcattactatatgtctgaagctttatcgcagttggctaaacataaagaagct
ctggaatttgctatcgcagcccaatctttggctccatcaaattctcaagtagcagaacga
ttggagcgtgtacaaggggatcttgctgcagttgaatctgaaagaaatagtaagccaaat
gatggagcacacaggtctgaacctcgaggtgaaagagttctatcactgagtgacatactc
taccgatcagagggtaatagtgatgtttcacaagatggtccaagatctgaaagggaagat
tctgattatgatgaggaactagagctggactttgaaacgtcgatctcaggtgatgaagag
catgatatcgagcccaatattgtacaaggaagcttaaacttgagaattcatcgaagaagt
gattctgctagagaagttggtggtgcaaacggcccatctggatccccttcttcgtcatct
caaaatgaaagaataccatatcagcctgaggcagctattgatatgaaacagagatatgtt
ggccattgtaatgttggaacggacataaaacaggccagctttcttggccagcgaggtgaa
tatgttgctagtggaagtgatgatggcagatggtttgtctgggaaaagcgaactggtaga
ctgataaaaatgcttcaaggagatgaagctgtcgtgaactgtgtacagtgccatccggtt
gattgtgttgtggcaactagtggaattgacaacacaataaaaatttggacccccagtgcc
tcagtcccatctattgtggctggtggagccgctggaccagaaaatgctgacatttcggta
gtcatggaatccaatcagcgcagattaagccataatcgtgagactatcctgtacagccat
tctgaaattttggagcattttcgaatgcacgagtttgctgaaggaagcttgcacccattt
gagtgtgcccagagctga
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integrated database retrieval system
