Pyrus x bretschneideri (Chinese white pear): 103934808
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Entry
103934808 CDS
T03446
Name
(RefSeq) nuclear pore complex protein NUP160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103934808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103934808
03036 Chromosome and associated proteins [BR:
pxb03036
]
103934808
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103934808
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103934808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
DUF7874
Motif
Other DBs
NCBI-GeneID:
103934808
NCBI-ProteinID:
XP_009342831
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MGSRSSLAGMEVPISGSDSLKWIEISAPPSDASADADITAATTCVPPLTDDIASSVAIGD
PPVHLIWRIHKDHPHELELFELSASKDFPKVGLRITFPEALSPLVRVCKSEVDKDFTSHP
DLVYVLTVSGMAYLFKLGPISTYVSRYVFREDEVAKFNMNAYVPVTSAAGTPSGCLVVGR
DDGSIACFQLGTLDATAPGFALELRDELGIGRLWGFMSRGRMIAAVQDLAICFVHEKPLV
FVLHSDGMLRVWDLSCHSRIFSNNMNSSTLAGATLERLWIGHVDSGSNIIPLAIFYRQTS
EISSETICAYSFRCHFEERFVIMLEPSAQNIQLDEAGWVDVKLTSDKICILTNNGLLLHK
LLTNVNTEDACSYALQEDFVADQLFQSSDHSSDDLLLLAHSILSSSKEHIVPVVSSIYLR
RLLLPGVHHNIALRLTLLDYNRHWSDSDFQSLTADMLKKEILSLIENEGVNDNSTSIVCC
WKNFCSRYFQNWCKSNAPYGLLLDSYRGTFGLIRTNSVSLFRCSEDIERLIAGTSDDLGD
LAGFELDSFDDALDYEVLVEMLRCVVNVSQQLGKTASAIFYESFVSAPRVISAEEITPRL
LKILESGYSSTVAMLHISDLGPDFAWEKTLADHKNLRKFSIDMLLSLHALYEKSGTWSRI
LNVIEKYLKFLIPRKMMPKFDAEMSLDINASILVQATSQVAKVMFESALDILLFLSYLVS
ISAQIHMLHDDVSKIQFDLIPMIQEIIFEWLLIHFFATTPSESAAIEDFSSQLSLLQIDS
NMRRRTWNEKLGKCEFTLAFVFLPSIQTSSRDQSRDSSRDIPDVNDIIISMRDFASWIIW
GHTGESFTFLSRATDLALILLRHGQYDAVECLLTIVEAHLQKEKTSHSIQDTEGGWCILH
HLLGCCFLAQAHRGLHGLPKERKVTEAVRCFFRASSGKGSSEALQGLPQEAGLPNLGFTG
SLSASAWRLHYYQWAMQIFEQYNISEGACQFALAALEQVEEAFSVEDELHGRDLANESVD
TIKGRLWANVFKFTLDLNLYYDAYCSIISNPDEESKYICLRRLIIVLYDRGAIKILCGGQ
LPFIGLTEKVEHELARKADCSDILAKPNLYKLLYAFEMHRHNWRKAASYMYLYSARLRTE
TALKDYQHTSLALKEILNGLSSAINALHLVHPAYAWIDPLLEINSLHNEHYPSKKAKIAI
DEQSASNNAYPETWKSYVGIEKMEDEYVLTSAEYLLSLAHLKPTSSGTQKTPLEVVDLLI
QANLYDMAFTVLLRFFKGSELKRGLERVFSAMSVKCCSHRVDSSWVGDDHRAHNLLLTSS
RDEVVAHGSPDVGSTKQQSKGINQWGTLELYLDKYKVFHARLPVIVAETLLRTDPQIELP
LWLVKMFKDGRKEKTWGMTGQESNPALLFQLYVDYGRYREATNLLLEYIGSFASMRPADI
VKRKRPFAVWFPYTAVQRLWCQLEELISSGHMVDQCNKLKNLLSGALLSHLELVKVDSED
ALSAFS
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaggtcgtcattggcaggcatggaggtcccaatcagcggcagcgattcattg
aaatggattgagatctctgctcctccttctgacgcctccgctgatgctgatattactgct
gctactacttgtgtccctcctcttacagacgatatcgcctcttcggtcgccattggagac
cctcctgtacatctcatatggagaattcacaaggaccatcctcacgaactcgagttattc
gagctcagtgcttccaaagacttccccaaagtcggacttcgaatcacttttccagaagcg
ctatctcccttggttcgtgtttgtaaaagtgaggttgataaggattttactagccacccc
gacttggtttatgtattgactgtctcggggatggcttaccttttcaaacttggacccatc
tctacttatgtatcccgctatgttttccgggaggacgaggttgccaagtttaatatgaac
gcctatgtaccagtaacaagtgctgcaggaacaccatctgggtgccttgtcgttgggagg
gatgatggatccatagcttgtttccaactgggcacacttgatgccactgctcctggtttt
gcgctggagctgcgggatgaattgggaattggtcgtttgtggggtttcatgtcaagggga
aggatgatagcagctgtgcaagacttggcgatatgtttcgttcatgaaaagccacttgta
tttgtgcttcattctgatgggatgttacgggtatgggatctttcatgtcatagcaggatc
tttagtaataacatgaacagttcgacactggcaggagctacattggaaaggttatggatt
ggtcatgttgacagtggttcaaacattattcctttggcaatcttctacaggcagacttcg
gaaatcagctcggagacgatctgtgcatatagctttcgttgtcattttgaggaaagattc
gttataatgctggaaccttcagcacaaaatatccaattggacgaggctggatgggttgat
gtcaaacttacttctgacaagatatgcatactgacaaataatggattactgcttcacaag
ttgttgacgaatgtcaatacggaagatgcatgttcttacgctttgcaggaggactttgtt
gcagatcagttgtttcaaagttctgaccattcttcagatgaccttcttttgctggcgcat
tcaatattgtcatcttcaaaggagcatattgtaccagttgtatcttcgatttacttacgc
aggctgcttcttcctggggttcatcataacattgctttgcgcttaaccttactggattat
aataggcactggagtgattcagatttccagtctctaacagccgatatgttgaagaaggaa
attctttccctgattgaaaatgagggagtgaatgacaattcaacatcaatagtttgctgc
tggaaaaatttctgttctcgctatttccaaaactggtgcaagagcaatgcaccatatggt
ttgcttcttgattcctacagaggaacttttggtttgataagaacgaactcagtatctctt
tttcgttgttcggaggatattgagcggcttattgctggtacttctgatgatcttggtgat
cttgctggatttgagttggattcatttgatgatgctcttgactatgaggtgctcgttgaa
atgctcagatgtgttgttaatgtcagccaacaattgggaaagacagcttctgctatattt
tatgaatcatttgttagcgcaccgcgagttatctcagctgaggaaattactcctcgcctg
ttgaagattttagaatctggatatagttcaacggtagcaatgcttcatatatcagatctt
ggacctgattttgcatgggagaaaaccttggcagatcataaaaacttgaggaaattttct
attgacatgctgttgtctcttcacgccttgtacgagaaatctggcacatggagtcgtatt
ttaaatgtgattgagaagtatctaaaattcctcatacctcggaaaatgatgccaaaattt
gatgctgaaatgtccttggatatcaatgcttccatcttggtccaggctacttctcaagtt
gcaaaggttatgtttgagtctgccctcgacattcttctgtttctaagctatctagtgagc
attagtgcgcagattcatatgcttcatgatgatgtatccaaaattcaatttgacttgatt
ccaatgattcaagaaatcatttttgagtggcttcttatccatttctttgccaccacaccg
tctgaatcagctgcaattgaggatttcagctctcagctttcattgttacaaattgatagc
aacatgagaagaagaacatggaatgagaagcttgggaagtgtgagttcactctggctttt
gtattcttaccaagtattcaaacttcctccagagaccagagtcgtgattcctcgagagac
ataccagatgtgaatgacattattatttcaatgcgggactttgctagctggatcatctgg
ggccacacaggggaatcctttaccttcctcagccgtgcaacagatcttgctttgatcctg
ctaaggcatgggcaatacgatgccgtcgagtgcctactcacaattgtggaggcacattta
caaaaggagaagacatctcatagtatccaggatacagagggaggatggtgcatacttcat
catcttttagggtgctgcttccttgctcaggcacaccgtgggttgcatggattgccgaaa
gagaggaaagtcactgaagctgttcgttgtttcttcagagcttcgtctggaaaagggtca
tccgaggctttacagggtttgcctcaggaagcggggttgccaaaccttggtttcactggt
agcttatcagcttcagcatggagacttcattactatcagtgggctatgcagatatttgag
caatataatattagcgaaggtgcttgtcagtttgctctcgccgcgcttgagcaagttgag
gaagcttttagcgtagaagatgagctgcatggacgagacctagccaatgaatcagtagat
actatcaaaggacgactttgggcaaatgtcttcaagtttactttagatcttaatctctat
tatgatgcatattgttcaataatttcaaacccagatgaggagagcaagtacatctgcttg
aggcgtctgataattgttctttatgaccgtggtgccataaagattctttgtggtggtcag
ctaccatttattggtcttacagaaaaggtagagcacgagcttgccaggaaggcagattgt
tcagatattttagcaaagccaaacttatacaagttgctttatgcatttgaaatgcatcga
cataactggagaaaagcagcaagctacatgtacctatattctgctcgtttgagaacggaa
acagctctgaaagattaccagcacacgtcattggcactaaaggaaattctgaatgggctc
tcttctgctatcaatgcacttcatcttgttcatcctgcctatgcttggattgatccacta
cttgagataaattctcttcacaacgagcactatccgagtaaaaaggccaaaattgcaata
gatgaacagagtgccagcaacaatgcttatcctgaaacatggaaatcttatgtcggtata
gagaagatggaggacgagtatgtgcttacttctgcagaatatttgctttcattggcacat
ctcaaacctacatctagtggaacccagaaaacaccactagaggttgttgatctcctgatc
caggcgaatttatatgatatggcatttacagtccttttaagattcttcaaaggttcagag
ttaaagaggggattggaaagagttttctctgccatgtcagtgaaatgctgttcacataga
gttgattcttcatgggttggggatgatcacagagcacataatcttctgttgacttcatca
agggatgaagtggttgctcatggttcacctgatgtgggttctacaaaacaacaatccaag
ggaatcaatcaatggggaactcttgagctttatcttgacaaatataaagtgttccatgcc
cgtttaccagtaattgttgctgaaactcttctccgtacggatcctcaaatcgaattgcct
ctttggctggtaaagatgttcaaggatggaagaaaggaaaagacttgggggatgacaggc
caagaatcaaatccagcattattattccaactatatgttgattatggtcgatacagagaa
gctacaaatcttttgctcgagtatataggatcctttgcatcaatgagaccggctgacata
gtcaagcgtaaaagaccatttgcagtctggtttccatacacagcagttcagcgtctgtgg
tgccaacttgaggaattgatcagttcaggccacatggtagatcaatgtaacaagctcaag
aatttgttaagtggagctttgctgagccatcttgaactggtaaaagtggactcagaagat
gcgctttctgcttttagttga
DBGET
integrated database retrieval system
