Pyrus x bretschneideri (Chinese white pear): 103934867
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Entry
103934867 CDS
T03446
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103934867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103934867
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
103934867
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103934867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Glyco_transf_N
Motif
Other DBs
NCBI-GeneID:
103934867
NCBI-ProteinID:
XP_009342897
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MAHGGGPRQVKLDRESELRIEVGYDAPLKLRLLSGTAEIFGTELPPDFWLTFPPRLKFAV
FTWNGATIEMEGSTETEYTADETPNISYVNVHAVLEERRHRAKPLPPDDPNSQVLLDTCS
LLCWGKLVQIFQCVLXXXGCIAATPIEMPIDPVEGIPLDIPLVYFYGQTTPSNNVDLYKV
LVKELAQVVERQLSGNAESRASGMVINTMGWIEGQGYELLLHAIDTFNANVVLVLGQEKL
WSMIRNVLKNKPGVDVVKLQKSGGVVSRN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacggcggcggaccaaggcaggtgaaactggaccgagagagcgagctcagaatc
gaagtcggctacgacgcccctctcaagctccgcctgctcagcggcaccgctgagatcttc
ggcaccgagcttccccctgatttctggctcaccttcccgcccaggctcaaatttgctgtt
tttacttggaacggagcaacaattgagatggagggcagtacggaaaccgagtacacggct
gatgagactccaaatatcagctatgtgaatgtgcacgccgtactggaagaacggagacac
cgcgctaaacccttgccgcccgatgaccccaattctcaggtactacttgacacttgctca
cttctatgttggggaaaattagtgcaaatttttcaatgtgttttannnnnnnnnggatgc
attgccgctactcctattgaaatgcctattgatccagttgaaggaattcctcttgatatt
cctctcgtttatttctatgggcaaacaactcctagtaataatgtagatttatacaaagtg
cttgtgaaggagcttgctcaagtggtagaaagacaactttctgggaatgctgaatctcga
gcttctggaatggtgatcaataccatgggatggatagaaggtcaaggctacgagttgctt
cttcatgcaattgatacattcaatgccaatgttgtcttagttctgggccaggaaaaactt
tggagcatgatcagaaatgtactaaagaacaagcctggtgtggacgttgtaaaacttcaa
aaatctgggggtgttgtatccaggaat
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