Pyrus x bretschneideri (Chinese white pear): 103935887
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Entry
103935887 CDS
T03446
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03410
Base excision repair
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103935887
03410 Base excision repair
103935887
03420 Nucleotide excision repair
103935887
03430 Mismatch repair
103935887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxb03032
]
103935887
03036 Chromosome and associated proteins [BR:
pxb03036
]
103935887
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103935887
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103935887
DNA Replication Termination Factors
ELG1-RFC complex
103935887
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103935887
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103935887
Check point factors
HRAD17(Rad24)-RFC complex
103935887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_11
AAA_assoc_2
AAA_5
DUF3802
AAA_14
AAA_24
SLFN-g3_helicase
nSTAND3
PhoH
ResIII
AAA_2
AAA_28
AAA_7
AAA_30
AAA_19
DNAX_ATPase_lid
Ribophorin_II
AAA_18
Gp44_lid
NPHP3_N
AAA_25
RNA_helicase
CPG4
Parvo_NS1
DUF815
IstB_IS21
TIP49_C
bpMoxR
TIP49
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-GeneID:
103935887
NCBI-ProteinID:
XP_009343977
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MAPLVQSSQPWVEKYRPRQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGRNQRPGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMI
TRVLHICQEEGLNLDPEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKELISVSGVV
PEEVVEAFFSACRGDNFDLANKEVNNVIAEGYPVSQMLSQLFEVVVQADDILDEQKARIC
KKLGEADKCLVDGADEYLQLLDVASSMMRAVCNMQEDFS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactggttcagagctctcaaccatgggtcgaaaaatatcggccgaggcaagtg
aaagatgtggcgcagcaggacgaggtggtccgagtcctcaccaataccctcgagacatca
aattgtcctcacatgctcttctatggtccgccgggtaccggaaaaaccaccaccgctctc
gccatcgctcaccagcttttcggacctgaactctacaagtctagagtgctggagctcaat
gcaagtgatgatcgtgggatcaatgttgttcggacaaagatcaaagattttgctgctgtt
gctgtgggtcgtaatcaacgtccagggggttacccgtgtccaccatttaagatcataatc
cttgacgaggcagattcaatgacagaagatgctcagaatgccctaagacgtacaatggaa
actcactccaaagtcacccgattcttttttatatgcaattatatcagcaggatcatagag
ccacttgcttcgagatgtgcaaagttcaggtttaagccactttcagaagatatcatgatc
acccgcgtattgcatatttgccaagaagaaggccttaacctggatccagaggccctgtca
acactaagctctatctcacaaggtgatcttcgtcgggctattacatacttgcagtcagct
gctcgcttatttggatcttctatttcttcaaaggagctgattagtgtgtctggggtagtc
ccggaggaagttgtcgaggcattcttctctgcatgcaggggtgataactttgacttggca
aacaaggaagtcaacaatgtaattgcagagggatatccagtctctcaaatgctttcacag
ttatttgaggtggtggttcaggcagatgacatattagatgaacagaaggctagaatatgc
aagaaattgggcgaagcagataagtgtcttgtggatggggctgacgagtacttgcagctg
cttgacgtggccagcagtatgatgcgagctgtttgtaacatgcaggaagatttctcttag
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integrated database retrieval system
