Pyrus x bretschneideri (Chinese white pear): 103936168
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Entry
103936168 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103936168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103936168
03036 Chromosome and associated proteins [BR:
pxb03036
]
103936168
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103936168
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103936168
PBAF complex
103936168
GBAF(ncBAF) complex
103936168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF6377
Motif
Other DBs
NCBI-GeneID:
103936168
NCBI-ProteinID:
XP_009344288
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MELAPHDPASNPLRPDEPELDLYSIPRPSSWFLWDEIHENERIALKEYFDGSSISRTPKT
YKEYRDFIINKYREDPSRKLTFTEVRKSLVGDVSLLHKVFNFLEKWGLINFCVNSGGGGG
FVAGGEERCKVKVEDGVPNGVRVAEMPNSIKPILPVSGQAKVGKVGGGGGVRRIGFPPLA
SYSNVFGDVKKEALVCGNCGGHCDSGYYKYSKGDFLICAKCFENGNYGENRLRDDFTLNE
AVEKSGTYGAEWTESETLLLLESVFKHGDDWDLVAQNVQTKTKFDCIAKLIDLPFGELVL
GSAYRKGNSSDFSANLDCSKQVQLSSSEDQETIITNGQLHEQTDDSKQNGDTLNEGPPLK
RQRIASLSDASSSLIKQVAAISTMVGPQITAAAADAAVNVLCEETSCSREIFDADDDSLT
NGLWSPAKNCETERDQDGDSEMQEKPTESESQDALFRKDDIPPSLQLRAAIGTALGAAAA
HSKLLADQEDREIEYLMATIIGTQMKKLHFKLNYFEDLEQIMKKEHAQIEDVEDFLVQER
INVLQRTFDSGVPRWMGHPSIKS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgctccacacgacccggcttctaatccgctccgacccgacgaaccagagctc
gacctctactccatcccacgcccctctagctggtttttgtgggatgagattcatgaaaat
gagagaattgcattgaaagagtattttgatgggagctcgatatctaggactccgaaaacg
tacaaggaatacagggattttatcattaataagtatagagaggatccttctaggaagctc
acattcactgaggttaggaagtcgcttgtgggtgatgttagtttgcttcataaggtgttt
aatttcttggagaagtgggggttgattaatttctgtgtgaattcgggtggcggagggggt
tttgtggccgggggtgaggagaggtgtaaggtgaaggttgaggatggagtccccaatggg
gtccgagtggctgaaatgccgaattccattaaacccattttgccagtttcaggtcaagct
aaagttgggaaggttgggggtggtggaggtgtgaggagaattgggtttcctccattggca
tcatattctaatgtttttggtgatgtgaagaaggaggcgttggtttgtggaaactgtggt
gggcattgcgattctggatattacaagtatagcaagggtgattttctaatttgtgcaaag
tgttttgaaaatggaaactatggggaaaacagattgagggatgacttcacgttaaatgag
gcagttgagaagagtggtacttatggagctgagtggactgaatcagaaaccctattactt
ttagaatctgttttcaagcatggggatgattgggaccttgttgctcaaaatgttcagacc
aagaccaaatttgattgtattgctaagctcattgatctgccttttggggagcttgtgttg
ggttctgcctacagaaaaggcaattctagtgactttagtgctaatttggactgttcaaag
caagttcagttatcttcgtctgaggatcaagagactatcataaccaacggtcagttgcat
gagcagacggatgacagcaagcagaacggagacactttaaatgaaggcccccctttgaaa
agacagcgcattgcttctctttcggatgctagtagttcactgattaaacaggtagctgcc
atatcaacgatggttggtccacaaattacagctgctgcagctgatgctgccgtaaatgtg
ctttgtgaggaaacctcatgttcaagggagatatttgatgctgatgacgattctcttact
aatggcttgtggtctcctgctaaaaattgtgagacagagagagaccaagatggggattcg
gaaatgcaggaaaagccaaccgaatcagagagtcaggatgcactcttcagaaaagatgac
atacctccaagtttgcaacttcgagctgccattggaacagctcttggagcagctgctgct
cactcaaaattattggctgatcaggaggatagagagattgaatatctgatggcaaccata
attgggacacagatgaaaaagttgcacttcaaactgaattacttcgaagatctggagcag
atcatgaagaaggaacacgctcaaattgaagatgtagaagattttctcgtccaagaacgg
attaatgtcttgcaaagaacatttgactccggcgtacctagatggatgggtcatccctca
ataaaatcttga
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