Pyrus x bretschneideri (Chinese white pear): 103936304
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Entry
103936304 CDS
T03446
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103936304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103936304
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103936304
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103936304
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103936304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
103936304
NCBI-ProteinID:
XP_009344418
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MEDSDGGLNFDFEGGLDAPATVSASAGPSRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP
VCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVL
QKIQHLTSYNYNNSNKFYQQRNAGFPQQGDKYQPAQGPNNFVGKPTTAESGNVQQQQQQP
QQLQQTQQHVGPAVAQTQNLPNGLANQANRSALPLPQGTSRYFIVKSCNRENLELSVQQG
LWATQRSNESKLNEAFDSAENVILIFSVNRTRHFQGCAKMMSRIGGSVGGGNWKYAHGTA
HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELELSVGEQLASLLYLEPD
SELMEISIAAESKREEEKAKGVNPENGGENPDIVPFEDNEEEEEEESEDEEDSFGQVPGA
GNDGRGRGRGGGVMWPPHMALPRGGRPMPGMQGFPPGMMGPDAMPYGPDGFVMPNPFGMG
PRGFNPYGPRFSGDFTGPNPGMMFRGRPQQPGFPPGGFGIMGPGRAPFMGGIHPGRGGRP
AGMSPMFPPPPPPSSQNPNRMPKRDPRGASTDRKGQDMSGPAGGPDDETQYGAGNNSRHD
DSESEDEAPRRSRHGDGRKKRRDSEGDATSEH
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcagacggaggcctcaacttcgacttcgagggaggcctcgatgcacccgcc
accgtctcggcctccgccggcccctcccgccaaacggtgtgtcgtcactggctgcgcagc
ctttgtatgaagggcgatgcctgtgggttcctccaccaatacgacaagtcgcgcatgccc
gtgtgccgcttcttccggttgtacggcgagtgccgcgagcaggactgcgtgtacaagcac
actaacgaggatatcaaagagtgtaatatgtacaagttgggtttttgtccaaatggtcct
gattgccggtatagacacgcaaagctgcctggacctccacctccagtggaagaagtcctt
cagaagatccagcatttgacttcttacaattacaacaactcaaataagttctatcaacaa
aggaatgctggttttccccaacaaggagataagtatcagcctgcacaaggacccaacaat
tttgtgggaaaacctactacagcagagtctgggaatgtccagcagcagcaacagcaaccg
caacagcttcaacaaacccaacaacatgttggccccgcagtcgcacagacacaaaatctt
cccaatggcttagctaatcaggcaaatagaagcgcgttgcctttgcctcaaggaacatct
aggtattttattgttaaaagttgcaaccgagaaaatttggaattatctgtacaacaagga
ttatgggcaactcagaggagcaacgagtccaaacttaatgaagcttttgactctgctgaa
aatgtgattttaattttctcagtcaaccggactcgacatttccagggttgtgcaaagatg
atgtccagaattggtgggtctgttggtggagggaattggaaatatgcacacggaaccgcg
cattatgggcgaaatttctctgtcaaatggttaaagctatgtgaactgtcctttcacaaa
actcgtcatttgaggaacccctacaatgagaacctaccagtgaagataagtagagattgt
caagagctagagctctccgtcggtgagcagttggcgtccttgctttatcttgagccagat
agtgaacttatggaaatttcgattgcggcagaatcaaaacgcgaagaagaaaaagcaaag
ggagttaatccagagaatggtggtgagaatccagacattgtcccatttgaggacaatgaa
gaggaggaagaggaagaaagtgaagatgaggaagatagcttcggtcaagttcccggagca
ggaaatgatggcagaggaaggggcagaggaggaggagtcatgtggcctcctcacatggct
ctaccaaggggtggcagacctatgcccgggatgcagggttttcccccaggaatgatgggt
cctgatgcaatgccctatggacctgacggatttgtaatgccaaatccgtttggtatgggg
cctcggggtttcaatccgtatggtcccaggttttcaggtgattttacagggcccaaccct
ggcatgatgtttcgtgggagaccacaacaacctggatttccacccggtgggtttgggatc
atgggtcctggacgtgcaccatttatgggagggatacatccaggccgaggtggtcggcca
gcaggtatgtctccaatgtttccaccacccccaccaccatcatctcaaaaccctaaccgg
atgccgaagagagatccaaggggagcttccactgatcggaagggacaagatatgtcaggt
ccggctggtggaccagatgatgagacacagtatggtgctggaaacaactctagacatgat
gatagcgaaagtgaggatgaggccccgaggcggtcgaggcatggagatggaaggaagaaa
cggcgagactcggaaggagatgcgacctccgagcactag
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