Pyrus x bretschneideri (Chinese white pear): 103936762
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Entry
103936762 CDS
T03446
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103936762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103936762
03041 Spliceosome [BR:
pxb03041
]
103936762
03036 Chromosome and associated proteins [BR:
pxb03036
]
103936762
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103936762
Spliceosome [BR:
pxb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103936762
Complex B
103936762
Complex C
U2 SnRNP specific factors
103936762
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103936762
TFTC complex
103936762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
103936762
NCBI-ProteinID:
XP_009344905
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQRATGIVCAINGNFSGGKAQEIVVARGKVLDLLRPDENGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMVGACEKQKLVYVLNRDTSARLTISSPLEAHKSHTIVYSICGVDCGFDNPM
FAAIELDYAEADQDSTGQAANEAQKHLTFYELDLGLNHVSRKWSDQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQDKPDLRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDIFKVTLDHDNDKVSELKIKYFDTIPVTTSMCVLKSGFLFAASEFGNHSLYQFQAI
GEEPDVESSSATLMETEEGFQPLFFQPRKLKNLVRIDQVESLMPIMDMKVNNLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNVSDEFDAYIVVSFANAT
LVLSIGETVEEVSESGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDLTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSLSGVPESLLFLEVQASIGGEDGADHPASLFL
NAGLRSGILFRTVVDMVTGQLSDSRSRFLGLRAPKLFSISVRGKHAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCSEGVVSVAGNALRVFTIERLGETFNETVIPLRYTP
RKFIIQLKRKLLVIIESDQGAFTAEEREAAKKECFEAAGLGENGNGNVEQMENGGDEEDP
LSDEHYGYPKAESDKWVSCIRVLDPKTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLA
VGTAKGLQFWPKKSVTAGYIHIYRFLDDGKSLELLHKTQVDGVPLALCQFQGRLLAGIGP
VLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFA
DDCVPRWLTASFHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGA
PNKVEEIVQYHVGDVVSCLQKASLIPGGGECIIYGTVMGSLGSLLAFTSRDDVDFFSHLE
MYMRQEHPPFCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagccttacactccagcgcgccaccggcatagtttgcgccatcaacggc
aatttctccggcggaaaggcccaggagatcgtcgtcgcccgcggcaaagttctcgacctt
ctccgtcccgacgaaaatggtaagatccagactctcctctctgttgaaattttcggcgca
attaggtcgttagctcagtttaggctcactggctctcagaaggactatattgttgtcggg
tccgattcgggtcggattgtgattctagagtataataaggagaagaatgtgtttgataag
attcaccaggagactttcgggaaatcgggttgtcgaaggatagttccgggccagtatttg
gccattgaccccaaggggagggctgttatggttggggcatgtgagaagcagaagcttgtt
tacgttttgaatagggatacttctgctaggttgacgatttcgtctccgttggaggctcac
aagtcgcatacgattgtgtattcaatttgtggggttgattgtgggtttgataatcccatg
tttgctgccattgagttggattatgcggaagctgatcaggactctactgggcaggcggct
aatgaggcgcagaagcatttgactttctatgagctcgatcttgggctcaatcacgtatcg
aggaagtggtcagatcaggttgataatggtgcaaatatgctggtcacagttcctggaggt
ggggatgggccaagcggtgtattggtctgtgcggaaaattttgtgatttataagaaccag
gataaaccggatctcagggctgtgattcctaggcgtgcagatttgcctgcagagcgtggg
gttcttatagtttcagcagctatgcacaagcagaaatcaatgttcttttttcttttgcag
acagagtatggagatatatttaaggttactctggatcatgataatgacaaggtctcagaa
ttaaagataaagtattttgatacaattccagttacaacttcaatgtgtgtgttaaagtct
gggtttttgtttgctgcgtcagagtttgggaatcactctttgtaccagttccaggcaata
ggggaagaacctgacgtggagtcttcatcagccacattgatggaaacggaagaaggtttc
cagcccttgtttttccagcccagaaaactgaaaaaccttgttaggattgatcaagttgag
agcttaatgccgataatggatatgaaggtcaataatctctttgaggaagaaacacctcaa
atatttacactttgtgggcggggtcctcgttcatccctcaggatactaagacctggttta
gctatcagtgagatggccgtgtcagagcttcctggtgtaccgagtgcggtctggacagtg
aagaagaatgtgtccgatgaatttgatgcatacattgtggtgtcatttgcaaatgctact
cttgtgctttcaattggtgagacagttgaggaagttagtgaaagtgggtttcttgacact
accccatcacttgcagtttctttgataggtgatgattctctcatgcaagtgcacccaaat
ggaattagacatattagggaagatggacgtattaatgaatggagaactcctggaaagagg
acgattgtaaaggttggctctaatagacttcaggtagttattgcactgagtggaggagaa
ctcatatattttgaggttgatttgacgggtcagttaatggaggtggagaaacatgaaatg
tctggagatgtagcttgtctagacattgctcctgtacctgaagggagacagagatctcgt
ttccttgcagttggttcatatgacaacacgattcgtattttgtcattggatcctgatgac
tgtatgcaaattcttagtgtgcaaagtctttctggagttccagaatctcttctctttctt
gaggttcaggcgtcaattggtggggaggatggtgctgatcatcctgctagccttttccta
aacgctggtttacgctctgggattttgttcagaacagtggtggatatggtcacaggtcag
ctctctgattcccgttctcgattcttgggactaagagcgccaaagctattttctattagt
gtgagaggcaagcatgctatgctttgcttgtcaagtcggccctggcttggttatatccat
caaggacattttctcttaacacccctatcgtatgagacccttgaatatgctgcctcattt
tcatccgatcaatgttcggaaggtgtagtttctgttgctggaaatgctttgagggttttt
actattgaaagattgggagaaacatttaatgaaactgtgattccactgaggtacacccct
agaaagtttatcattcagctcaaacgaaagcttttggtaattattgaaagtgatcaagga
gcattcacagcagaagagcgtgaagctgccaaaaaagagtgttttgaggctgcgggttta
ggtgaaaatggaaacggtaatgtagagcagatggaaaatggcggagatgaggaggatccc
ttatctgatgagcactatgggtatcctaaggcagagtctgacaaatgggtgtcttgcatt
agagttcttgaccccaagacagcaactacaacatgtcttctggagcttcaggataatgaa
gctgcattcagtatctgtacagtgaatttccatgacaaggagtatggtacacttttagct
gttggcacagcgaagggactgcagttttggccaaaaaagagtgtaacagcaggctatata
catatatataggttcctagatgatggaaagtcccttgaacttttgcacaagacacaagtg
gatggtgttcctcttgccttgtgccagtttcaaggaaggttactagctgggatcggacca
gtgctcagactctatgatttggggaagaaaagattgctcaggaagtgtgagaataagctg
tttcccaacacaattgtgtcaatccaaacttatcgcgatcggatttatgtaggtgacatt
caagagtcattccactactgcaagtataggcgggatgagaatcaattgtatatctttgct
gatgattgtgttccaagatggcttacagcatccttccatatagattttgacaccatggca
ggtgcagacaagtttgggaatgtttattttgtgcggttaccacaggatgtttcagatgag
atagaagaagatccaacgggtgggaggataaaatgggagcagggaaagttgaatggcgct
cccaacaaagtagaggagatagtgcagtatcatgttggtgatgttgtcagctgcttgcag
aaggcatctctaattccaggtggtggggagtgcatcatctatggaacagtgatgggtagc
ttgggttccttacttgcgttcacctcacgtgatgacgttgacttcttttctcacttggag
atgtatatgaggcaggagcacccacccttttgtggtagagatcacatggcttatagatca
gcgtatttcccggtcaaggatgtgattgatggagatctgtgtgagcagttcccaacattg
cccatggatctgcagagaaaaattgcagatgagttggatagaactcctggagagatactg
aagaagcttgaggaaattcgaaacaagatcatttaa
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integrated database retrieval system
