Pyrus x bretschneideri (Chinese white pear): 103936861
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Entry
103936861 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxb03009
]
103936861
03036 Chromosome and associated proteins [BR:
pxb03036
]
103936861
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103936861
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Helicases
103936861
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103936861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
YgbB
FlpD
CMS1
Zip
Motif
Other DBs
NCBI-GeneID:
103936861
NCBI-ProteinID:
XP_018500431
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MPSMDVSDYLLAGTTPKDKKEKKKLKSETLDDAADSPTTEKKSKKESKHKKRKASDDEDR
SETSSEMGEPVNVKPPKSEEKSKKKSKKAKVEEPEEEEKSKEDPNAVLKFRISAPLRAKL
KENGIESLFPIQAMTFDTILDGLDLVGRARTGQGKTLAFVLPVLESLTNGPAKAFRKTGY
GRPPTVIVLLPTRELAKQVFSDFEAYGGAVGLAACCVYGGSPYGAQESKLRRGVDVVIGT
PGRIKDHIERGNIDLSTLKVRILDEADEMLRMGFVDDVELILGKVKDVSKVQTLLFSATL
PSWVKGISSRFLKPDKKTVDLVGNEKMKASTNVRHIVLPCSSSARSQLIPDIIRCYSSGG
RTIIFTETKEAASGLAEALPGARALHGDIQQGQREVTLAGFRSGKFLTLVATNVAARGLD
INDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRRSNFSKIERESGVKFEHI
SAPQPLDIAKAVGQDAAEMITKISDSVIPAFKSVAEELLNTSGLSAVDLLAKALAKAAGY
TEIKKRSLLSSMENHVTVLLEAGKPIYSPSFAFGVLRRFLPEEKVESVKGMALTADGNGA
VFDVVAEDLDLFLAGQENAANVSITVLKSLPDLQEKESRNTRFGGGGRFGRGGGGGFRND
RYSNNRSGGGAGGGRGRGNRW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatggacgtatcggattatcttctcgcgggaaccactccgaaggataagaag
gagaagaagaaattgaaaagcgaaaccctagacgacgccgccgactcgccgactactgag
aagaagtcgaagaaggagtctaagcataaaaagcggaaggcttcggatgacgaggacagg
agcgagacgagctccgagatgggcgagcccgtgaatgtgaagccgccaaagagcgaagag
aagagcaagaagaagtcgaagaaggcgaaggtggaggagccggaggaggaggagaagtcc
aaagaggatcctaatgcggtgttgaagtttcggatttcggcgccgttgagggccaaattg
aaggagaatgggatcgaatccttgtttcctattcaggccatgacattcgataccattttg
gatggtttggatttggtcggtcgggctcgaactggacagggtaaaactctagcttttgtg
ttgcctgttttggagtccttaacaaatgggcctgcaaaagcatttagaaagactggttat
ggtaggcctccaactgttatcgtgcttttacccactcgggaacttgccaaacaggttttc
tccgattttgaagcttacggtggtgctgtggggctagcagcatgttgtgtgtatggtgga
tctccttacggggctcaagaaagtaagttaaggagaggggtggatgttgttattggaacg
cctggccgtataaaggatcatatagagaggggcaatatcgacttgagtaccttgaaagtt
aggatccttgacgaagctgatgaaatgctgaggatgggctttgttgatgatgttgaactc
attctaggcaaggtgaaggatgtaagtaaagttcaaacgctactttttagtgcaaccttg
ccgagttgggtgaaaggcatttcttctaggtttctcaaaccagataagaaaactgtagat
cttgttggtaatgaaaaaatgaaggcgagcaccaatgttaggcatattgttcttccttgc
tccagttcagcaagatcgcaacttattcctgatatcatacgttgttatagcagtggagga
cgcacaatcattttcactgagacaaaggaagctgcttctggacttgctgaggcgttgcct
ggagcccgagctttgcacggggacatacagcagggccaacgtgaggtcacacttgctggt
ttcaggtctggcaagtttttgacattagttgccacaaatgtggcagcgcgtggactggat
atcaatgatgttcaattaattatccagtgtgaacccccacgtgatgtagaagactatatc
catagatctggacgcacaggaagagcaggaaattctggagttgctgtcatgctttatgat
ccaagaaggtcaaatttttcaaaaatcgagagggagtcgggggtgaaatttgaacacatt
tctgctcctcagccacttgatatagctaaagcagtaggtcaagatgcagcagaaatgata
accaaaatttctgatagtgtaattcctgctttcaagtctgttgccgaggagctacttaac
acctctggcctatctgcagtagatctactggcaaaagcacttgctaaagctgctggctac
accgagataaagaagagatcacttcttagctctatggagaaccatgtcacagtacttctc
gaggctggaaagcccatttattcaccgtcttttgcttttggggtcttgaggagattcttg
ccagaggagaaggttgagtcagtgaagggtatggcactaacagctgatggaaatggtgca
gtttttgatgtggtagctgaagatttggatttgtttcttgctggtcaggaaaatgcagct
aatgtgagcataacggtgttgaaatcactgcctgatttacaagaaaaagaatcaaggaat
acaagatttggcggtggtggaaggtttggccgtggtggtggaggtggttttcgaaatgat
aggtattccaacaaccgatccggtggtggtgctggtggtgggagaggtcgcggcaacaga
tggtga
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