Pyrus x bretschneideri (Chinese white pear): 103937241
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Entry
103937241 CDS
T03446
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03410
Base excision repair
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103937241
03410 Base excision repair
103937241
03420 Nucleotide excision repair
103937241
03430 Mismatch repair
103937241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxb03032
]
103937241
03036 Chromosome and associated proteins [BR:
pxb03036
]
103937241
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103937241
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103937241
DNA Replication Termination Factors
ELG1-RFC complex
103937241
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103937241
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103937241
Check point factors
HRAD17(Rad24)-RFC complex
103937241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Rad17
Mg_chelatase
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_24
AAA_5
AAA_11
RuvB_N
nSTAND3
AAA_assoc_2
AAA_25
AAA_19
AAA_28
ABC_tran
AAA_30
DNAX_ATPase_lid
MeaB
bpMoxR
RNA_helicase
AAA_18
KTI12
DO-GTPase1
IstB_IS21
NTPase_1
AAA_3
AAA_7
FtsK_SpoIIIE
SLFN-g3_helicase
SRP54
Motif
Other DBs
NCBI-GeneID:
103937241
NCBI-ProteinID:
XP_009345441
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MALSSSSSAYDMPWVEKYRPTKVADIVGNEDAVSRIQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKVVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDEEILGRLMI
VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVK
NMVRNILEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAH
MRICDGVGSYLQMCGLLAKLSLVRETAKET
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtcttcttcttcgtcagcctacgacatgccgtgggtggagaagtacaggccc
accaaggtcgccgacattgtgggcaacgaagacgccgtgtccagaatccaggtcatcgct
cgcgacggcaacatgcccaacctcatcttagccggtcctcctggaactggtaagaccact
agcatactggctcttgcacatgagcttttgggaccaaactataaggaggctgttttagag
ctgaatgcatcagatgacaggggaatcgatgttgtgaggaacaaaattaaaatgtttgct
caaaagaaagttacactgccttccggacgccataaagttgtcatattggatgaagctgac
agcatgacatctggagcacaacaagctttgaggcgaacaatggaaatatattcaaattct
actcgtttcgctcttgcgtgcaatacatcttccaaaatcattgagcctattcagagtaga
tgtgcccttgtccggttttctagattgactgatgaggagatacttggtcgcctaatgatt
gtcgttcaagctgagaaggttccttatgttccagaaggtcttgaagccattattttcacc
gctgatggtgatatgaggcaggcactgaataacttgcaagctacaaacagtggattccgg
tttgtgaaccaagaaaatgttttcaaggtctgtgaccagcctcacccattgcatgtaaag
aatatggtgcgcaacatattggaagggaaatttgatgatgcttgttcgggtctcaagcag
ctctacgatctgggttactccccaacagacataatcacaacctttttccgtatcataaaa
aactatgatatggctgagtttttgaaattggagttcatgaaggaaactggatttgctcac
atgagaatctgtgatggagttggctcgtaccttcagatgtgtggtcttctggctaagctt
tccctagttcgtgaaaccgcgaaggaaacataa
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integrated database retrieval system
