Pyrus x bretschneideri (Chinese white pear): 103937702
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Entry
103937702 CDS
T03446
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103937702
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103937702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pxb02000
]
103937702
Transporters [BR:
pxb02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103937702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Motif
Other DBs
NCBI-GeneID:
103937702
NCBI-ProteinID:
XP_009345922
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MESFLGFAAFLLLFQVIFFASLMSAEETDSPALSFSDIASSGKRNSEEYCAMYDICGERS
DGKVLNCPYGSPSVTPDELFSAKIQSLCPTISGNVCCTELQFETLRAQVQQAIPFLVGCP
ACLRNFLNLFCELSCSPNQSQFINVTSVSEVNGNMTVDGIDFYIADTFGEGLFDSCKDVK
FGTMNTRAIEFIGAGAKNFEEWFDFIGAKAEPGFPGSPYAIEFKLVVPESSGMELMNVSV
YSCGDTSLGCSCGDCPSSPVCSNPEPPQPKKKPCSIRILSIEVKCIEVSVAILYILLVFA
FFGWSFFGRMRRRRGSGSSEEPLLNVIHDDDIDSVNLHKDESVATKRHAMDPQVTEGIHL
APVQGYMSNFYRSYGSWVSRNPSLVLFSSVAIVVILCVGLVRFKVETRPEKLWVGPGSKA
AEEKQYFDSHLAPFYRIEQLIIATLPDPKDGKSPSIVTDDNIQLLFDIQNKVDGIRANYS
DSVVALTDICLTPIGQDCATQSILQYFKMDPENFDSYGGVVHVEYCFQHFTSADTCLSAF
QAPLDPSTALGGFSGNNHSEASAFIVTYPVNNAAGDVGNENGKALAWEKAFIQLAKEELM
PMVLSRNLTLSFSAENSIEEELKRESTADVITILVSYLVMFVYISLALGDAPHLSSFYLS
SKVLLGLSGVILVMLSVLGSVGFFSAVGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKR
QPLDLPLEIRISNALAEVGPSITLASLSEILAFAVGSFIPMPACRVFSMFAALAVLLDFF
LQVTAFVALIYFDFLRAEDNRVDCFPCIQVAPSSEGTSEGIYHRRAGLLTRYMKEVHARI
LGYWVIKMVVVAVFLAFTLASITLCTSIEPGLEQKIALPRDSYLQGYFNNISEHLRIGPP
LYFVVKDYNYSSESRHTNQLCSISKCDSNSLLNEISRASSTPESSYIAKPAASWLDDFLV
WISPEAFGCCRKYLNGSYCPPDDQPPCCSPDEGPCGLGGVCKDCTTCFRHSDLVNDRPST
AQFREKLPWFLNALPSADCAKGGHGAYTNSVDLKGYGSGVISASEFRTYHTPLNAQGDYV
NSIRAAREFSSRMSDSLKMDIFPYSVFYIFFEQYLDIWRVALINIAIALGAIFIVCLLMT
SSVWSSAIILLVLAMIVVDLMGVMAIFNIQLNAVSVVNLIMSIGIAVEFCVHIMHAYLVS
HGNRSQRATKALSRVGPSVFSGITLTKLVGVIVLAFSRSEIFVVYYFRMYLALVLIGFLH
GLVFLPVVLSLFGPPNRHASIDMQEVESSPVLS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtttctgggttttgctgcttttttacttctctttcaggttatctttttcgcc
tctttgatgagtgctgaggagacggattcaccggctctttcattttcggacatcgcatca
tcggggaaaaggaactctgaagaatattgtgcaatgtatgatatatgtggtgaacgcagc
gacggaaaagtcctgaattgcccttatggctccccatccgtgacgcctgatgagctattt
tctgccaaaattcaaagtttgtgtccaacaataagtgggaatgtttgttgcacggagctt
cagtttgaaacattacgcgcacaagttcaacaagcaattccgtttcttgtaggctgccca
gcatgcttgaggaacttcctaaatcttttttgtgagctttcttgctctccaaatcagagt
cagtttatcaacgtgacctctgtgtccgaggttaatggaaatatgactgtggatggcatt
gacttttacatagctgacacttttggagaagggttgttcgactcttgcaaggatgttaaa
tttgggactatgaacacacgggcaatagaatttattggtgccggtgctaaaaattttgaa
gaatggttcgattttattggtgcgaaagcagagcccggcttccctggttcaccttatgcg
attgagtttaagctggttgttcctgagtcatctggaatggagctcatgaatgtgtcagtt
tattcatgtggtgacacttcactaggctgctcttgtggtgactgcccttcatctccagtg
tgttcaaatcctgaacctcctcagccaaagaaaaagccatgctccattagaattctatct
attgaggtaaagtgcattgaagtttcggttgccatattgtatattctcttagtttttgca
ttctttggttggagcttttttggtcggatgagacgaaggaggggatctggatctagcgag
gaaccattgttgaatgtcattcatgatgatgacattgactctgttaacttgcacaaagat
gaaagtgttgccacaaagaggcatgctatggatcctcaagttaccgaagggatccaccta
gctcctgttcagggatatatgtcaaacttttacaggagttatggaagctgggtctccaga
aatcccagtcttgtgctgttttcctcggtggcaattgttgttattctgtgtgtgggtcta
gttcgtttcaaggtggagacacggccagagaagctgtgggtaggtcctgggagcaaggca
gcggaagagaaacaatactttgacagccatcttgcccccttctacagaattgagcagctc
ataatagcgactctgccagatccaaaagatggcaagtcaccaagtattgtcacagatgat
aatattcagctactttttgacatacaaaacaaggttgatggaattcgtgctaattattct
gactcggtggtagctctaactgatatttgcttgacgcctattggccaagattgtgccacc
caaagcattttgcagtattttaagatggaccctgaaaactttgacagctatggaggggtt
gtacatgtagagtattgctttcagcattttacttctgcggacacatgtttgagcgcgttt
caggctccacttgatccaagcactgccttgggaggattctcaggaaacaaccattcagag
gcttctgcattcattgtcacctacccagttaataatgcagctggtgatgtaggaaatgag
aatgggaaggcattggcttgggagaaggcttttattcagctagcgaaggaggaactgatg
ccaatggttctgtctcggaatcttactctctcattctcagccgaaaactcaattgaggaa
gagttaaaaagagaaagtactgcagatgtgataaccatattagtaagctatctggtaatg
tttgtttacatatctctagccttgggagatgcacctcatttgtcttctttttacctctcg
tccaaggtcctgcttggcttgtcaggagtcatacttgtcatgctttctgtccttgggtct
gttggatttttcagtgctgttggagttaaatctacattaatcataatggaagtcattccg
ttccttgttcttgctgttggtgtagataacatgtgtatactggtacatgcggtgaaacgg
caaccactggacttacctttagaaatacgaataagtaatgcacttgctgaagttggccca
tccataacgctggctagtttatctgagattctggcatttgcagttggaagtttcattcct
atgccagcttgtcgtgtcttctccatgtttgctgctcttgctgttctactggacttcttc
ctgcaagttactgcatttgttgcgctgatatattttgactttttgagagctgaggacaac
agggttgattgttttccatgcatacaagtcgctccatcttctgagggaactagtgaagga
atatatcatagaagagctggattgctgacccgctatatgaaggaagtacatgcacgcatt
cttggatattgggtgattaaaatggttgttgttgctgtctttcttgctttcaccttggca
agcattacattatgtactagtattgaacctggtttggaacagaagattgcccttccccgg
gattcttaccttcaggggtacttcaataacatttcagagcatcttaggattggaccaccg
ttatattttgttgtcaaggattacaactacagctcggaatcaagacatacaaatcagtta
tgctccatcagtaaatgtgattccaactcccttttaaatgagatatccagagcatcttca
acaccggaatcaagctacattgctaagccagctgcctcttggcttgatgattttcttgta
tggatttcacctgaggcttttggttgctgtcggaagtatttaaatggttcttattgtccc
cctgatgatcagccaccttgttgttcacctgatgaaggtccttgtggccttggtggagtt
tgcaaagattgtacaacatgctttcggcactcagatttggtcaatgatcgtccatctaca
gcacagtttagagagaagcttccatggttcctaaatgcactgccttctgctgattgtgca
aaagggggccatggtgcttacactaatagtgtggatctaaaaggttatgggagtggtgtt
ataagtgcatctgagttccgtacctatcacacaccacttaacgcacaaggtgattatgtc
aattcaatacgagctgcgcgggagttcagctcaagaatgtctgattctttaaagatggat
atctttccgtactcggtgttctatatcttctttgagcaatatctggatatatggagggta
gctttgatcaacattgctattgcactcggtgcaatcttcatcgtttgtctgctcatgaca
tccagtgtatggagctctgctatcattttacttgtactggcaatgattgttgtggacctc
atgggtgtaatggccattttcaatatccaactaaacgcagtctctgttgtaaatcttata
atgtcaatcggaattgctgttgagttctgtgtccatataatgcatgcttacttggtgagt
catggcaacaggagccaacgagcaacgaaagctctaagtagagtgggaccttctgtgttc
agtgggattacacttacaaagctggttggagtaattgtcctagccttctcaagatcagaa
atttttgtggtttactattttcgaatgtacctggcattggttcttattggtttcttgcat
gggctcgtctttttgccggtggtattgagcctgtttggtccgccgaataggcacgcaagt
attgatatgcaagaagttgaatcttcaccggtcttgagttga
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integrated database retrieval system
