Pyrus x bretschneideri (Chinese white pear): 103938476
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Entry
103938476 CDS
T03446
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103938476
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pxb01002
]
103938476
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103938476
03036 Chromosome and associated proteins [BR:
pxb03036
]
103938476
Peptidases and inhibitors [BR:
pxb01002
]
Metallo peptidases
Family M1
103938476
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103938476
Coactivators
SAGA/TFTC/STAGA complex
103938476
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103938476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
103938476
NCBI-ProteinID:
XP_009346752
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MAKARKPKNEDAKPENSGPVVRHQKLCLSIDVDKRRIYGYTELKIVVPEIGIVGLHAENL
GIESVSVDGEQTEFEYYPQSNHKDAESERRWSWVTSPSSAADAAGSTYISALERELVPNL
LINCCKAFKAGSEPQEQLLGDNEVQQSSGEAKQNVRLVRVDYWVEKAETGVYFHDAILHT
DNQIRRARCWFPCIDDNSQSCCYDLEFTVAQNLVAVSTGNLLYQVLSKDDPPRKTYVYRL
DVPVSARWISLVVAPFEILPDQQFGLISHMCLPFNLSKLRNTVEFFHSAFSCYKDYLAIE
FPFGSYKQVFIEPEMAVSSLSSGASMSVFSSQVLFDEKIIDQTIDTRIKLAFALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKLQANCAVCKADDSGATALS
SAASCKDLYGTQCIGIYSKIRSWKSVAILQMLEKQMGPESFRKILQAIVNRAPDKIRSLR
SLSTKEFRHFANKVGNLERPFLKEFFPRWVELCGCPLLRMGFSYNKRKNMVELAVLRGCT
GGSDSIASAVNANPEPEKRDIDNGWPGMMSIRAHELDGTFDHPVLPMAGETWQLLEIQCH
SKLAARRFQKPKKSSKLDGADDNGDATPALDMRSSMESPLLWMRADPEIEYLAEIHFNQP
VQMWINQLEKDKDVVAQAQAIATLESLPQLSFSVVNALNNFLIDSKAFWRVRIEAAFALA
NTASEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDISEYFVLEAIPHAIAMVRAADK
KSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALIESVGELEFGQQSILLLSSLLKRIDRL
LQFDRLMPSYNGILSVSCIRALTQIALKLLGFVPMDRVFELVKPFRDIKAVWQVRVEASR
ALLDLEFHCKGIDAALQLFIKYLDEETSFRGQVKLAVHAMRLCQIRGGSDLTDNIRSETL
VALLRLLEGQMAFNNIFLRHHLFCILQILAGRPPTLYGVPRDHKPFRLGDAESFQEQKNI
FAAFIPESKYVEPPSEAPNHSHDDLTAPETSRDVFAAPEIFTDGFSIPDPETSRDGFALP
AASKDDLGAPEPTTDGFGAPEPPGGGLGDPEPSGGSLVAKEPSIGGVGAPEPPIGSFDGL
TVSEPIKDSLAVLEPFKDADTVSNSHRRKLTVKIRVKSSATTSRAEGDNQTVERSQGGHL
ETDRGASSSVSVDAPHKNFAEVSLSNQNLEEVNSWHDLGSRMTASIGSAKLASDVDDIGK
ELQCTADSSKVSALPQPEDPSPSFIQDNRDAEVQKYASLQELSVPRNDINGGSSGKADSL
PRGKEKEKKKDKEKKRKRDGHKGHRDNPEYLERKRLKKEKKQKEKEIAKLLNESAKVPST
ELPSKTEVLGVKSATVQLKPVEPSGSNKLAITGVETARPAPSEGATSATPSSTTSATPKF
RIKTKIRTLNNP
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcccgaaagcccaagaacgaagacgccaagcctgaaaactccgggcccgtc
gtccgccaccagaagctctgcctctccatcgacgtcgataagcgtcgcatttatgggtac
actgagttgaagattgtggtcccagaaattgggattgtagggttacacgcagagaatttg
gggattgagagtgtttcagtcgacggtgagcagaccgagttcgaatactacccgcagagt
aatcataaagatgcggagagcgagaggagatggagctgggtgacatcgccgagctctgct
gccgatgcggcagggtcaacatatatatcggctcttgagagagagctggtcccgaattta
ctgatcaattgctgtaaggctttcaaggccggaagcgaaccgcaggagcaactgcttggg
gataatgaagtgcagcagtcttctggagaagccaagcagaatgtgaggttggttcgtgtt
gattattgggtagaaaaagcagagacaggagtttattttcatgatgccattctacatact
gataaccagatacggcgtgcacggtgctggttcccttgtatagatgacaattcacaaagt
tgctgctatgatctggagttcactgttgcacaaaatcttgtggctgttagcactggaaac
ttactataccaggttttgagcaaggatgatcctcctcgcaaaacatatgtttatagatta
gatgttccagttagcgctcggtggatatctttggtggttgcgccttttgaaatccttccc
gatcagcagtttggtctaatatctcacatgtgcttgccctttaatctgtcgaagcttcgg
aatactgtagagttttttcatagtgcatttagctgttacaaggattaccttgcgatagaa
tttccttttgggtcatacaagcaagtttttattgagcccgagatggcagtatcatcatta
agttcgggggcatccatgagcgtttttagttctcaagttttatttgatgaaaagatcatt
gatcagaccattgacacaaggattaaacttgcgtttgctcttgcaagacaatggtttggt
gtctatatcactcccgaggcacctaatgatgagtggctgctggacggtcttgctgggttt
ttgacagatttttttatcaaaaaacatttgggaaataatgaagcccgctaccggagatac
aagttgcaggcaaattgtgctgtttgcaaagcagatgatagtggcgcaaccgctttaagt
tctgctgcttcttgtaaggatttgtatggaactcaatgcattggaatatacagcaaaatt
aggtcatggaaatctgtggcaatccttcaaatgctggaaaagcagatgggaccagagtct
tttcgtaaaattttgcaggcaatagttaatagggctccagataagatccggtctttaaga
tcccttagtacgaaggagtttaggcattttgctaataaggttggcaatcttgagcgtcca
tttcttaaagaattttttcctcgctgggtggaattgtgtggttgtccactgctgaggatg
ggcttctcctataacaagaggaagaatatggttgaattggcagtgttacgtggatgcaca
ggcggatcagattcaattgcttcagcagttaatgcgaatccagaacctgaaaagcgagac
attgacaatggatggcctggaatgatgagcatcagggctcacgaacttgatggtacgttt
gatcatccagttctgccaatggctggagaaacatggcagctgctggaaatacaatgccat
tcaaagcttgctgctagacgctttcagaagcctaaaaagagttcaaaactagatggggct
gatgataatggggatgctacaccagctctagacatgcgttctagtatggagtcgccactg
ttgtggatgagggcagacccggaaattgaatatcttgctgaaattcatttcaatcaacct
gtacagatgtggattaatcagttggagaaggacaaagatgtcgttgcacaggcacaagca
attgcaacactggagtctctaccacagctttccttttctgttgttaacgctctgaataat
ttcctcattgactccaaggccttctggagagttcgaattgaggccgcgtttgctttggct
aatacagcatctgaggatactgattgggctggtctactccatttagtgaaattttataaa
agccgaaggtttgatgcaaacatcggactccccaagccaaatgacttccatgacatttct
gagtactttgttcttgaggccattcctcatgctattgctatggtcagagctgctgacaag
aaaagtccaagagaggctgtagagtttgttttacaacttttgaagtacaatgacaacaat
gggaacccttactctgatgtcttctggcttgctgcattaatcgagtctgttggagaactt
gaatttgggcaacagagtattctccttttatcgtctcttctgaagcgcattgatcgcctc
ttgcaatttgacaggttgatgcctagctacaatggtatcttgtcggtcagttgtattagg
gccttgacacagattgccctaaaactgttgggatttgttcctatggatcgcgtgtttgaa
cttgtgaaaccttttcgggatatcaaggcagtatggcaggttcgggttgaagcaagcaga
gcactgcttgatcttgaattccattgtaaaggcattgatgcagctttgcaactgtttatc
aaatatttagatgaagagacgtccttccgagggcaggtgaagctggccgtgcatgctatg
aggttatgccagattagaggtggatctgatcttactgacaacatcaggagcgaaactctt
gtggctttgcttcgtctacttgaaggccagatggcttttaataatatctttcttcgtcat
cacttattctgcatcctacaaatccttgccggaaggccgccaacactatatggagtgcca
agagatcataaaccatttcgtttaggtgatgcggaaagcttccaagagcagaaaaacatc
tttgctgctttcattccagaaagtaaatatgtggaaccaccttccgaagctccaaaccat
tcacatgatgatttaactgctcctgaaacttccagagatgttttcgctgctccagaaatt
tttacagatgggttttctattccagatccagaaacttccagggacgggtttgcccttcca
gctgcttccaaggatgatttgggtgctccagaacctacaactgatggttttggtgctcca
gaacctcctggtggtggtttgggtgatccagaaccttctggtggcagtttggtcgctaaa
gaaccttccattggtggtgttggtgctccagaacctccgattggtagttttgatggctta
acggtttcagaacctatcaaggatagcttggctgttctggaacctttcaaggacgcagat
accgtttctaacagccatagacggaagctgacggttaagatcagggtcaaaagttctgct
actactagtagagcagaaggtgataatcaaactgttgagaggtcgcaaggtgggcatctt
gaaactgatcgtggcgccagcagttcagtatctgtggatgctccgcacaaaaactttgca
gaggtgagccttagcaatcaaaatcttgaggaagttaactcttggcatgatcttggatcc
cggatgactgccagcattggtagcgcaaaacttgctagcgatgtcgatgatataggaaag
gaattgcagtgcactgccgattctagcaaagtttctgcactgcctcagcccgaagatcca
tcacctagctttatccaagataaccgagatgcagaagtacagaagtatgcaagtctccaa
gaactttcggttcctaggaacgatattaatggcggttcatctggaaaggcggattctctt
cctcgcgggaaagaaaaggagaaaaagaaagacaaggaaaagaaacgaaagcgggatggc
cataagggccaccgagataatcccgagtatttggagcggaagcgcctaaagaaggagaaa
aagcagaaggagaaagaaatagcgaagttgttgaacgagagcgccaaagtaccatccacg
gagctaccaagtaagacagaggtgcttggagtgaagtcggcaaccgtgcaactcaagccg
gtcgagcctagcggttccaacaaattggcaatcacaggggttgaaaccgccaggcctgcg
ccatccgaaggtgctacttccgctactccttccagtacaacttccgctactccgaagttt
cgtattaagacaaagatccgaacactgaacaatccatga
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integrated database retrieval system
