Pyrus x bretschneideri (Chinese white pear): 103938841
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Entry
103938841 CDS
T03446
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103938841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103938841
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103938841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
103938841
NCBI-ProteinID:
XP_018500884
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MQRQQSILSFFKKPSPEKQSSDAATAPNGRRVSQLPVTQQEPKPSVSKQTTAALEVTGTD
TPPEKAPRQILPVNAESLKESSPFANIMLKFMKVDDTQKAPQSQRKQSNAGSSNGCTESG
KFTEPQGLCEQAVASQHFLFNKSVTNSNKKTGEASVVHIESDIVGPETPGAQRLVPRMKR
IQDDIPKFADKLDGPLQNSSKRVKLLQEPAVALDKSNGEASDMASKFEWLDPSRIRDGSR
RRPDDPLYDKTTLYIPPDALKKMSASQRQYWDVKCQYMDVVLFFKVGKFYELYELDAEIG
HKELDWKMTLSGXGKCRQVGISESGIDDAVEKLVVRGYKVGRIEQLETSDQAKARGAKAV
IPRKLVQVVTPSTTTDGNIGPDAVHLLALKEVSSEVHNGSVVYGFAFVDCAALKFWIGAI
SDDASCAALGALLMQVSPKEVIYESRGLSREAQKALKKYSTGSAALQLTPVQSLTDFSDA
SEVRNVIQLKGYFKGSSNSWNHGLDSEIHHEITLSALGVLIGHLSRLMLDDALRNGDILP
YQVYRGCLKMDGQTLVNLEIFSNNADGGPSGTLYAYLDNCVTSSGKRLLRKWLCHPLKSV
EAINNRLDVVEDILVHPEMIPLIAQYLRKIPDLERLLGRIRASVQSSASLLLPLFGKKVL
KQRVKVFGTLVKGLRSGLDLLKLLQNEGHIIERLSKVFKVPSLSGSDGLDQHLTQFEAAV
DSEFPNYQNPEATDSHAETLSILIELFIEKVKEWSDAIHAINCIDILRSFAVTASFPSGT
MSRPVILPQSEDMTLNGENQSPTLATKGLWHPFALGENGGLPVPNDVVLGEGTDGHHPRT
LLLTGPNMGGKSTILRATCLAVILAQLGCYVPCEKCVLSLVDVIFTRLGATDRIMTGEST
FFVECTETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHY
HPLTKEFASHPHVTLQHMACSFKSKSACPSKSDQELVFLYRLTNGACPESYGLQVAMMAG
IPEQVVEAASKAGQVMKKSIGQSFKTSEQRSEFSTLHESWLKTLLAATLTGNYNDEDCFD
VLFCLQHELKSSYRSGN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgccagcagtcgatcctctccttcttcaagaaaccctcgcccgaaaagcagagc
tccgacgccgcaactgcaccaaacggccgccgagtatctcagcttccggtgacgcagcag
gaaccaaagccctccgtttctaagcagactacggcggctcttgaagttaccggaactgac
actccgccggagaaggctccacgtcagattttgcctgtgaatgcggagagcctgaaagag
tcgtctccatttgccaacatcatgcttaaatttatgaaggtcgatgatacgcaaaaagct
cctcagagccagaggaagcaatcaaatgctggttcctctaatggttgtacagagtctggt
aaatttaccgagcctcaaggattgtgtgaacaagcagtggcatctcaacattttctattt
aacaaaagtgttaccaattccaataagaaaactggtgaagcttctgttgtgcatattgaa
agtgacattgtcgggccagaaacgcctggggcacagcgtctggttccccgaatgaaacgg
attcaagatgatattccgaagtttgcggataagttagatggtccgttgcaaaattctagc
aaaagagtgaaacttctgcaggagccagcagtagccttggacaagagtaatggagaagca
tctgacatggctagcaagtttgagtggcttgacccatcccgaatcagagatggaagtaga
aggcggcctgatgatcctctctatgacaaaacaacactgtatataccacctgatgctttg
aagaagatgtcagcatcgcaaagacaatattgggatgtcaagtgtcaatatatggatgtt
gttcttttcttcaaagtgggaaaattttatgagctttatgaactagatgctgaaattggc
cataaggagcttgattggaaaatgaccttaagtggnnnagggaaatgtcgtcaggttggt
atctctgaaagtgggattgatgatgctgtcgaaaagctggttgtgcgtggctataaagtt
ggaaggatagagcagctggagacttctgatcaagcaaaagccagaggtgccaaagctgtc
attccgagaaagctggttcaggtagtcacaccatcaaccacaactgacggaaatattggg
cctgatgctgttcatcttcttgcattaaaagaggtgagctctgaggtgcataatggttca
gttgtatatggatttgcttttgttgattgtgctgctttaaagttctggattggtgccata
agtgacgatgcctcctgtgctgctttgggggctttattgatgcaagtgtcacctaaagaa
gttatatatgaaagtagagggctgtcaagagaagctcaaaaggccttaaaaaagtactca
acaggttctgctgcactgcaactgactccagtgcagtcactcactgatttttcagatgct
tctgaagttagaaatgtaattcagttgaaagggtacttcaaagggtcttctaattcatgg
aatcatggacttgacagtgagatacaccatgaaatcactttatctgcacttggcgttctt
attggccatctatccaggttgatgttagatgatgctttacgaaatggagatatattacct
taccaagtttataggggttgccttaaaatggatggacagacactggtaaatttggaaatt
ttcagtaataatgctgatggtggtccatcaggtacactgtacgcatatcttgataactgt
gtaacatcatccggtaagcggcttttgaggaagtggctctgccatcctctgaaatctgtt
gaagccattaataataggcttgatgtagttgaagatatactggtacatccagaaatgata
ccacttattgctcaatatcttcgcaagattccagacctagaaaggttactcggacggatt
agggcaagtgttcagtcctcagcttctctcctactcccgttgtttggcaaaaaagtattg
aaacagagagtgaaagtgtttgggactcttgtgaagggcctgagatctggattggatttg
ttaaagctattacagaatgaagggcatatcattgaacgattatcaaaagtatttaaagtt
ccaagtctgagtggcagtgatgggcttgatcaacatcttacccaatttgaagctgctgta
gatagtgagttcccaaattaccagaatcccgaggctactgattcacatgccgaaacactc
tccatcctgattgagctatttatcgagaaagtaaaagaatggtctgatgccatacatgcc
atcaactgtattgatatactaagatcttttgcagttactgcaagtttcccatctgggacc
atgtccagacctgttattttgcctcaatcagaagatatgactttgaatggagagaaccaa
agtcctacacttgctactaaaggactatggcatccatttgctcttggggaaaacggagga
ctgcctgtcccaaatgatgtggtcctaggcgagggtacagatggccatcatccacgcact
ttactactgactgggccaaatatgggtggaaaatcaactattcttcgcgccacatgtctt
gctgttatactagcccagctgggttgttacgtgccttgtgagaaatgtgttctctcactt
gtagatgtcatcttcacacggcttggagccactgatcgtatcatgactggcgagagtacg
ttctttgtggaatgcacagaaacagcatcagttcttcaacatgccactcaagattctttg
gttattcttgatgaattgggtcgtggaacgagcacttttgatggatatgcaattgcatat
gctgtctttcgccatcttgtcgagaaggttaactgcagattattgtttgcgactcactat
cacccgctaaccaaggaattcgcttctcatccacacgttacattacaacacatggcatgt
tctttcaagtcaaaatctgcatgcccttcgaaaagtgaccaagagctggtatttctctat
cgccttaccaatggggcatgcccagagagttacggactgcaagtagcaatgatggctggg
atcccagagcaggtggtcgaagctgcttcaaaggccggccaagtaatgaagaaatccatt
ggacaaagtttcaagaccagcgaacagagatcagagttttctactctccacgagagctgg
ctgaagaccctgctagctgccactctgaccggtaattacaatgacgaagattgttttgat
gtgctgttttgtttgcagcacgaacttaagagctcgtatcgatcgggcaactga
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