Pyrus x bretschneideri (Chinese white pear): 103939986
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Entry
103939986 CDS
T03446
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103939986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103939986
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103939986
mRNA cycle factors
Common to processing body (P body) and stress granule
103939986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
103939986
NCBI-ProteinID:
XP_009348342
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MMIPQMDKMSAPSSRERAQRLYDKILELENRRRRSTQARIPSDPNAWQQMRENYEAIILE
DHAFSEQHNIEYALWQLHYKRIEELRAHFGAATASARSNTSQGVKGPIRPDRVTKIRLQL
KTFLSEATGFYHDLIVKIRAKYGLPLGYFSEDSENQIVMDKDGNKGLISCHRCLIYLGDL
ARYKGLYGEGDSKTREYAAASSYYMEAASLWPSSGNPHHQLAILASYSGDELVAVYRYFR
SLAVDSPFSTARDNLIVAFEKNRQSYSQLSGNTNASAVKELPARLAGKGRGKGEIIPASK
DNNTKVSLVKERASSAQETYKAFCIRFVRLNGILFTRTSLETFAEVLSVVSSGLCELLCT
GAEEVLNFGADAVENGLAIVRLISILIFTIHNVKKESEGQTYAEIVQRAVLLQNAFTAVF
ELAGLILERCVQLCDPSSSFLLPGILVLVEWLACCPDVAAGSDADEKQSSVRSKFWKVCI
SFFNSLLSTGPMSIDDDEDETCFNNMSRYEEGETENRLALLEDFELRGFIPLIPAQTILD
FSRKHSFGSDGHKEKGARVKRILAAGKALANVVKVDQKAVYFDSKLKKFIIGFEPQGQND
IVPTSHRHMATGDDNLQENQVESTINLGAAYPKTELSMEGDEDDEVIVFKPVVAEKRPDA
VSTTWTAYDGLETGKNASTGDQTVDGTYGSATLDNLHHQNAFRADSQTPVSFANGIHQHL
QPIQSHASKFSVETGFGVGTQLPASIANTIPQNLQPIQSNALNPAMEEEMSLANSLRSMG
FMGSGHALKSEPVAVSVPYQLPVNGSASGMFYSHTKASEAFLPYKVDAIADRLTVKTSSA
LPTGIRKSPVSRPVRHLGPPPGFSRVPPKNANESIYGSDSMSENLVMDDYSWLDGYQMPS
STKVNGLNNYVNYSSHSNPHSFTNSNGLSGAVNFPFPGKQGTPIQLSVENQKSWQDFQRL
DDLKLHHEMQLQQQQQLVNGNQHPNPQPEQYQGQSFWTGRHFV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatgattccacagatggataaaatgtctgctccttcatcaagggagcgcgcccaacgt
ctatatgacaagattcttgagttggagaataggcgtcggaggtctacccaagcacgaatt
ccatcagatcccaatgcctggcaacagatgcgtgagaattatgaagcaataattcttgag
gaccatgctttctctgagcagcacaatatcgagtatgctttgtggcagttacattacaag
cgcattgaggaattgcgagcacacttcggtgctgctacagcttctgcacgttcaaacaca
tctcagggtgtgaaggggccaattcggcctgatcgagttacaaaaataagactgcagtta
aaaacattcctttcagaagcaactggattttatcatgatttaatagtgaagatcagagcg
aaatatgggcttcctcttggttatttctcagaagattctgaaaaccagattgttatggac
aaggatggaaataaaggtctaatatcgtgccacagatgcttgatatatttgggtgacctt
gcacgctacaaaggattgtatggggaaggggactcaaaaactcgtgagtacgctgcagcc
tcaagttactacatggaagctgcatctctctggccatccagtgggaacccccatcaccag
cttgctatattggcttcctattcgggggatgagttggtggctgtttatcgatattttcgt
agcctggcggtggatagtcccttttcaactgcaagagataacttgattgttgcatttgag
aagaatcgtcagagttactctcaactgtctgggaatactaatgcttctgcagtcaaagag
ttgcctgcacggttggcaggcaaaggtagagggaaaggggaaataatacctgcatctaaa
gataacaataccaaggtaagccttgttaaggaaagagcatccagtgctcaggagacctat
aaggctttttgcatccggtttgtccgtctgaatggcattcttttcacgcgtactagcctg
gagacatttgcggaagttctatctgtggtaagcagtggcttatgtgagcttctgtgtact
ggagcagaagaggtgctgaattttggtgcagatgctgttgagaatggacttgctattgtt
agacttatctccatattgatattcacaattcataatgtgaaaaaggaaagcgaaggtcag
acatatgcagaaattgtacaacgtgctgtcctactgcagaatgcatttactgctgttttt
gagttggcggggctaatcttagagagatgcgtgcagttgtgtgatccatcttcaagtttc
ctcttaccaggtattcttgttttagtggaatggttggcatgttgtcctgatgttgcagct
ggaagtgatgcagacgaaaaacagtcctctgttagatccaaattctggaaagtttgcata
tccttcttcaatagtctcttgtcgactgggccaatgtcgatagatgatgatgaagatgag
acttgctttaataacatgagcagatatgaagaaggtgaaactgaaaatcgtcttgctttg
ttggaggattttgaattgagaggatttattccactaattccagcacaaacaatattggac
ttctcgaggaagcattcttttggaagtgatggccataaggaaaaaggggcccgtgttaaa
aggattctggcagcaggcaaagctcttgcaaatgtggttaaggttgaccagaaagcagta
tattttgattcgaagttaaagaaatttatcataggctttgaacctcaagggcaaaatgat
atcgttcctacctcccatcgacatatggctactggagatgataatctacaagaaaatcaa
gtagagagcacaatcaatttgggagctgcatatccaaagacagagttatccatggaaggg
gatgaggatgatgaagtaatagtatttaagccagtagtggctgagaaacgacctgatgcc
gtaagcactacgtggacagcgtatgacggcctagagactggtaaaaatgcttctacaggt
gatcaaacagttgatggaacttatggttctgccactttggataatctacaccatcaaaat
gcttttagggctgattcacaaacacctgtatcttttgctaatggtatacaccagcacttg
caaccaatccagtcacatgcttccaagttttcagtggaaactggttttggtgttggtaca
caactacctgcatcaattgccaatactatcccccagaatttacaaccaattcaatcaaat
gctttgaatccggcaatggaggaagagatgtctcttgctaatagcttaaggagtatggga
tttatgggaagtgggcatgcactaaaatctgagcctgtggcagtttctgtaccataccaa
ctcccagtgaatggtagtgctagtggtatgttttacagccacacgaaagcttcagaagct
tttttgccatataaagttgatgcaattgctgacaggttgactgtaaagacatcatcagct
ctgcctacaggtatccgaaaaagtccagtaagtcgacctgttaggcaccttggtccacca
cccggttttagccgtgttcctcctaaaaatgcaaacgaatcaatttatggttcagattca
atgagtgagaatctagttatggatgattacagctggttggatggatatcagatgccatct
tcaacgaaagtaaatgggctgaataattatgttaattactcatctcattccaatccccat
agcttcacaaacagcaatggcttaagtggagcagtgaacttcccctttcctggtaaacag
ggtacacctatacaactatcagtggaaaaccagaaaagctggcaagatttccagaggctt
gatgacctcaagctacaccatgaaatgcagctgcagcaacagcaacaacttgtaaatgga
aatcagcacccgaatccacagcctgagcaatatcaaggacagtctttctggacgggccgc
cattttgtgtga
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integrated database retrieval system
