Pyrus x bretschneideri (Chinese white pear): 103940311
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Entry
103940311 CDS
T03446
Name
(RefSeq) uncharacterized RNA-binding protein C23A1.09-like
KO
K12876
RNA-binding protein 8A
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103940311
09122 Translation
03013 Nucleocytoplasmic transport
103940311
03015 mRNA surveillance pathway
103940311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103940311
03041 Spliceosome [BR:
pxb03041
]
103940311
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103940311
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103940311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103940311
NCBI-ProteinID:
XP_009348675
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MASGDVETVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGVGAASAVPKKTKGR
GFREDLNADRNSRLAASDFDSLNSSDGLEPQRSVEGWIILVTGVHEEAQEDHLQDAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFKEAKTAIDKMNGETLLTQVLTVDWAFSNGSFL
DGSRKNSRPLRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagacgtagaaacggtggacttcgagcccgaagatgacgacctcatggac
gaggacggagccgtcgacgccgagccctccgcctcccccagggccccactccccaagctc
aagtccgctatcaccggcgtcggagcggcgtccgccgtccctaagaagaccaaaggtcgc
ggattccgtgaagatctcaatgccgaccgtaacagccgcctcgctgcctccgacttcgac
tctctcaactcttctgacggcctcgaaccccaacgatccgttgagggatggattattctg
gtcactggggtacatgaggaggcccaagaggaccacctacaagatgcatttggtgaattt
ggggagataaaaaatttgcatttaaatcttgatcgccgcactgggtttgtgaagggatat
gcactgattgaatatgaaagttttaaagaggcaaaaactgcgatcgacaaaatgaatgga
gagacattacttacacaagttttaactgttgattgggccttcagcaatggatccttcctt
gatggatccaggaagaactcaagaccactaagagaacgtcgctcaaggagtcctaggagg
agatactaa
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integrated database retrieval system
