Pyrus x bretschneideri (Chinese white pear): 103940394
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Entry
103940394 CDS
T03446
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103940394
09122 Translation
03013 Nucleocytoplasmic transport
103940394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103940394
03041 Spliceosome [BR:
pxb03041
]
103940394
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103940394
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103940394
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103940394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
eIF2A
DSE1_N
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_IFT80_2nd
TP_0598_N
Beta-prop_WDR41
TRM82_WD
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
PAC11
Beta-prop_IFT122_2nd
DUF7099
Beta-prop_WDR11_1st
Beta-prop_Nup120_160
PROPPIN
WD_LRWD1
PD40
Motif
Other DBs
NCBI-GeneID:
103940394
NCBI-ProteinID:
XP_009348783
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MAETEEPAIPFKNLSSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWLVEPHGHGKA
KDIELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCAQLAELSGENINITYK
PDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWSTTSEIFFLTTGNGTVEVLA
YPSLKPVDTLMAHTAGCYCIAIDPFGRYFAVGSADSLVSLWDISEMLCVKTFPKLESPVR
TISFNHTGEYLASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKSNLLAYAGDDKN
KYQTDEGVFRIFGFKSAT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacggaggaacccgcaatacccttcaagaatctcagtagcagagagtaccag
ggccacaagaagaaagtgcattctgtggcttggaactgcacggggacgaagcttgcgtcg
ggttctgttgatcaaactgctagggtttggctcgttgagccccatggacatggtaaggct
aaagatattgaattgaaggggcacacagatagtgtggatcagctgtgttgggaccccaag
catgctgatttaattgccactgcctctggggacaagacggttcgtctttgggatgctcgg
agtggaaaatgtgcacagctggcagaacttagtggggagaacattaacatcacctataaa
cctgatgggacgcacatcgccgttggtaatagggatgatgaactaacaattttggatgtt
cggaagtttaagccaattcacaagcgaaagttcaattacgaggttaatgaaattgcttgg
agcacaacaagtgaaattttcttcttgacgactggaaacggtacggttgaagtactagca
tacccatctcttaaacctgtcgacaccctcatggctcatacagctgggtgttattgcatt
gccattgacccatttggaagatattttgccgttgggagtgctgattccttggtgagcctg
tgggatatttcagagatgctctgtgtgaaaacatttccaaaacttgaatcgcctgtgagg
acaataagcttcaaccacactggagagtatcttgcgtctgccagtgaagacttattcatt
gatatatcaaatgtgcaaaccggccggacagtgcatcaaattccatgtagggctgccatg
aacagcgttgagtggaatcccaaatccaatctacttgcatatgctggagatgacaagaac
aaataccaaactgatgaaggtgtttttaggatatttggcttcaaaagtgcaacctaa
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integrated database retrieval system
