Pyrus x bretschneideri (Chinese white pear): 103940501
Help
Entry
103940501 CDS
T03446
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103940501
Membrane trafficking [BR:
pxb04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
103940501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
Ig_TPPC8_3rd
Ig_TRAPPC9-Trs120_1st
SNAP
Ig_TRAPPC9-Trs120_4th
HetR_C
Motif
Other DBs
NCBI-GeneID:
103940501
NCBI-ProteinID:
XP_009348893
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MVDPANTPLGRMLLEEITPVVMVLRTPLVEEACLKNGLTLVQMLKPFCVFNNIDVPVRTA
SDQPYRLQKFGLRLFYELDIRQPNLEVAKERLKQVINQAADKDLSELCSDLPQIDNALSI
SESEVLPSWFQFFNKELVHSVSFSDHEAFDHPVACLVVVSSKDDQPINRFVDLFNTKKLP
SLLTNGAMDPKILKHYLLVHDKQDGPLEKATKILTEMRSTFGSDCQLLCINSSQDGVVEH
QDYPWVLYKFEDLPSQPLRCFLNVEDFNEIKDLMQDLSTKHIIPYMEQKIRLLNQQVAAT
RKGFRNQIKNLWWRKGKDDVVDSPSGPTYTFNSIESQIRVLGDYAFMLRDYELALSNYRL
ISTDYKLDKAWKRYAGVQEMMGLAYFMSDQSRKDAEYCMENAFTTYLKVAPSSQQNATRC
GLWWVEMLKARHQYKEAATVYFRVCTEEPLYSAVMLEQASYCYLLSRPPMLHKYGFHLVL
SGDRYKKSDQVKHAIRTYRGAMSVYTGTTWSHIKDHVHFHIGQWYALLGLYDLAANHVME
VLACGHQSKKTQELFLRDFLQIVQKTGKTFEVSKLQLPEINISSLRVIFEDHRTYASSAA
ASVKERIWVSLEEEMIPNLSTARTNWLELQSKLIPKMYKESNVCVAGEAVRVDIELKNPL
QIPLPLSSVSLLCELSAVSDEMKSVCDDADASSSLVEIQDGESTSLIHRDVNFESSLFSL
SDVDFSLAGGETIVVQLTVTPRVEGILQIVGVKWKLSGSVVGFHKFDTNPMKKISRNRIQ
KAKHPHCDNLKFVVVKSVPKLEGVIHPLPKRAYTGDLRHLVLELKNKSEFAVKNLKMKIS
HPRFLNLGKRDSLNLEFPACLEKKSSDQSAEHANLNDVSHALFLFPEDTIIHGETPLLWP
LWFRAAVPGNISLYITIYYEMSDISSTMRFRTLRMHYNLQVLPSLDVSFLISPCPSRLQE
FLVRMDVVNKTSSESFQIHQLSSVGNQWEISLLQPVDAIFPSQSLTPHQALSCFFRLKSR
GKSSTSEDEKSSHPRLQGTHLRLGTQGNNGPRFDIASSPLADFHLSERLYQEVLNKGDTN
PVDFILISRPLKNDINPEVSEPPRLFSHHACHCSTATTSPISWLVDGPRTLYHNFSASFC
EINLSMTICNTWDVVASVRINTSDSSTSDHLSDATPVQPATSSGDQDGWHDLSPVTDIKV
TSDVLGSRASKSIPMESVSPFIWSGSSCTRVHLDPMSRTEIPLQVCVFSPGTYDLSSYVL
HWNLLLSNDQENRDRSSSGTCQGYPYYLTVLQSD
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaatacgccacttggcagaatgcttttggaagagatcactcccgtt
gtcatggtgctccgtacgcccctcgtcgaagaagcctgcctcaagaacggcctcacctta
gtccaaatgctcaagcccttctgcgtcttcaacaacatcgacgtgcctgtgcggactgcg
agtgatcaaccctacaggcttcagaagttcggattgcggttgttttatgagttggatatt
cggcaaccgaatttggaggtagcaaaagagaggttgaaacaagtcataaaccaggcggcg
gataaagatctttctgaattgtgctcagacctgcctcagattgataatgcattatccata
tcggaatctgaagttctaccatcatggtttcagtttttcaacaaagagcttgtacatagc
gtctctttttcagaccatgaagcttttgatcatcctgtggcatgtctcgttgtagtttct
tcaaaggatgatcagcctatcaacagatttgttgacctctttaacaccaagaagttgccc
tcccttcttactaatggggcaatggacccaaagattttgaagcattatttgctagtgcat
gataaacaagatggccctttagagaaggcaactaaaattttaactgaaatgaggagcact
tttggctctgactgtcagttactgtgcattaattcttctcaagatggtgtggttgaacat
caagattatccctgggtgctttataaatttgaagatttacctagtcaaccgcttcgttgc
ttccttaatgttgaggattttaatgagataaaagacctgatgcaagatttatcaactaaa
cacattattccctacatggagcaaaaaatacgtttgctcaatcagcaggttgctgcaaca
aggaaaggttttaggaaccaaataaaaaatctatggtggagaaaaggaaaagatgatgtg
gtggattctcccagtggccctacgtacacctttaactccattgaatcccaaattagagtt
ttgggtgattatgccttcatgctacgtgattatgaacttgcattgtcgaattatcgccta
atatccacagattacaagcttgacaaagcctggaaacgctatgctggcgtacaggaaatg
atggggcttgcatatttcatgtcagaccagtcaagaaaggatgcagagtattgcatggaa
aacgcatttactacctatttaaaagttgcaccatctagccagcaaaacgcaactaggtgt
ggtctttggtgggtggagatgttgaaggcacgacatcagtataaagaggctgcaactgtt
tacttccgtgtttgtacggaggagccactgtattccgctgtaatgcttgagcaagcgtct
tattgttacttgctgtctagaccacctatgttgcacaaatatggatttcatcttgttctt
tctggtgaccgttacaagaaatctgatcaggtcaaacatgcaattcgcacatatagaggt
gccatgtctgtgtatacaggaactacgtggagccatatcaaagaccatgttcatttccat
attggacagtggtatgctcttcttgggctatatgatttggctgcaaatcatgtgatggag
gtcctggcttgtggtcatcagtccaagaaaacacaggagttattcctgagagacttcctt
caaattgttcagaaaacagggaaaacatttgaagtatcaaagcttcaattgccggagatc
aatatttcatctcttagggtaatttttgaggatcatcggacctatgcatcatctgcagct
gcaagtgtcaaagaaagaatatgggtctccttagaggaggaaatgattccaaatttgtcc
accgccagaactaattggttggagttacaatcaaagcttatcccaaagatgtacaaagag
tcaaatgtttgtgttgcaggagaagctgtcagggttgatattgaattaaaaaatccgttg
caaatccccctccctttgtctagtgtttccctattatgcgagctttctgctgtctctgat
gaaatgaaatccgtttgtgatgatgcagatgcaagtagctcgttagtggagattcaggat
ggagaatctactagtttaattcatagggatgtgaactttgagagttctttattttctttg
tctgatgtggacttttcattagcaggaggtgaaacaattgtggtgcaactaacggttact
cctagagtagaaggcattttacagattgttggtgtaaagtggaaattgtcaggctctgtt
gttggcttccataaatttgacactaaccccatgaagaagataagcagaaaccgaatacag
aaggcgaagcatcctcattgtgataatttaaagtttgtagttgttaagagtgtaccaaag
cttgagggtgtcattcatccactacctaaaagggcatatacaggagatttacggcatctt
gtgttggagttgaagaacaaatctgaatttgctgtgaagaatttgaaaatgaagattagt
catcctagattcttgaatcttggaaagcgagacagtttgaacttggagtttcctgcttgc
ttagaaaagaaaagttctgatcagtctgctgaacatgctaaccttaatgatgtttctcat
gccctgtttctatttcctgaggacactattattcatggggaaacaccattattgtggcct
ctttggtttcgggcagctgttcctgggaacatttccttgtacataacaatatattatgag
atgagtgatatttcaagcaccatgagatttcgcactttacgcatgcattacaatttgcag
gtattgccgtcattggacgtgtcattccttatcagtccttgtccatcaagattgcaagag
tttcttgtgcgcatggatgttgtcaacaagacaagctctgaaagtttccaaattcatcag
ttgtcatctgttgggaaccaatgggaaatctcactacttcaaccagttgatgccatcttt
ccttcacaatctttaacacctcatcaagcattgtcatgcttcttcaggctcaagagtcgt
ggcaagtcatcaacttctgaagacgagaaatcttcccatccccgacttcagggaactcat
ttgagattgggtactcagggcaataatggaccacgttttgatatagctagctctcctctg
gcagatttccacctctctgaaagactgtaccaggaagttttaaataagggagacacgaat
ccggttgacttcatattgatttcccggcctctgaagaatgacattaatcctgaggtttct
gagccaccgcgtcttttttctcatcatgcatgtcactgcagtactgcgaccacaagtcct
atatcatggctagtggacggacctcgaaccttataccataacttctctgcttctttttgt
gaaataaatcttagcatgactatatgcaacacatgggatgtagttgcatctgtacgcata
aacacctcggactccagtactagtgatcatttaagtgatgcaactccagttcaacctgcc
acgtcttctggcgaccaagatggatggcatgacctctcaccagtgactgacatcaaagtg
acttccgatgtccttggatcccgggccagtaagtcaattcccatggagagcgtctcccca
tttatttggtccgggtcaagctgtactagagtccatcttgatcccatgtcaagaactgaa
attcctcttcaagtttgtgtattctctcccgggacatatgatctgtcgagctatgttttg
cattggaatcttttactttctaatgatcaagaaaatcgggataggtcgtcttctgggacg
tgccagggatatccgtattaccttactgtactccagtcggattaa
DBGET
integrated database retrieval system
