Pyrus x bretschneideri (Chinese white pear): 103940813
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Entry
103940813 CDS
T03446
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103940813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103940813
03036 Chromosome and associated proteins [BR:
pxb03036
]
103940813
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103940813
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103940813
Chromatin remodeling factors
BAF complex
103940813
PBAF complex
103940813
GBAF(ncBAF) complex
103940813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
AT_hook
Motif
Other DBs
NCBI-GeneID:
103940813
NCBI-ProteinID:
XP_018501415
LinkDB
All DBs
Position
Unknown
AA seq
2255 aa
AA seq
DB search
MQSGGGGGGGPGRGVGPAGRAGSTSSAASPSSSSSAVSTPQLGFDSVQHQQHQQQQQQQQ
QQLGSRQPLHQQQFLRKPEGNEALLAYQAAGLQGVLGGGGSSQMPQQSRKFIDLAQQHGS
QDGQSRSQGVDQQAVNPVHQAYLQYAFQAAQQKSGLTMQPQQQAKMGLLGPPSGKDQDMR
LGNMKMQEVMSNQAPSQALASSSKNLTEHFIRGEKQVGQGQPSVSDQRSDSKPSAQPSGM
GQFMPGNMLRPMLAPQSQPSGQTMPNNQIALVNQLQAFALEHNIDLSQPGNANLMSQLIP
LLQSRISAQQKANESNIGAQSSPVPVSKQQVTSPPVAIESSPRANTSSDVSGQSSSAKAK
QTVAANPFGSGSNSSIFNNSNGPMQQFSVHGRENQMPPRQSNPIGNGMTSTYPTVSSANT
SQGVDHSFHVKNSQNNPETLQMQYHRQLSGSSPQAVVPNDGVSGNKSQSQGGLATQMGQQ
RHGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEMQPQQQLLPGGGNIHDK
SSGKTLEDHVRHMESNEKDSQAVASMNAQNGAKEEAFAGEEKAIVSTVHVQGALAVVKEP
TPLVSSGKEEQHSTLSSVKSDHEVERGIQKASARSEIKVDRGKSVASQVTQVAVSDVMQV
KKPAQASTVPLPKDVSSARKYHGPLFDFPFFTRKHDSLGSGVMVNNNNNNNNNLTLAYDV
KDLVFEEGVEVLNKKRTENIKKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLSDLQARL
RDEIDQHQQEIMAMPDRPYRKFVRLCERQRMELSRQVQASQKAMREKQLKSIFQWRKKLL
EAHWAIRDARTARNRGVAKYHERMLREFSKRKDDHRNKRMEALKNNDVERYREMLLEQQT
SIPGDAAERYAVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEE
VRTAAACAGEEVMIRNRFIEMNAPRDSSSVNKYYSLAHAVNERVIRQPSMLRTGNLRDYQ
LVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNW
KSELHTWLPSVSCIYYVGGKDQRAKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKY
IIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKA
FHDWFSKPFQKEAPTPNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGALPSKIS
IVLRCRMSAIQSAVYDWIKSTGTIRVDPEEEKLRIQKNPQYQPKVYKTLNNRCMELRKTC
NHPLLNYPFFNDFSKDFLVRSCGKLWILDRILVKLQKTGHRVLLFSTMTKLLDILEEYLQ
WRHLVFRRIDGTTSLEDRESAIVDFNRPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPD
PNPKNEEQAVARAHRIGQKREVKVIYLEAVVDKMASHQKEDELRSGGTVDSEDDLAGKDR
YIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHDV
PSLQEVNRRIARSEEEVELFDQMDEELDWIEEMTRYNQLPKWLRTSTNEVNAVIASLSKR
PSKTTLLGGNAGLESTEMGSGSSPKTERKRGRPKKNHPSYKELDDDNGEYFEASSDENEE
EGEVEELEDDEYSGAVEATPIIKEQVEEDVLECDGGYEYPKDSERVRNNHILEEAGSSGS
SSDSRRLMQTVSPVSSQKFGSLSALDGRPGSTSKRMQDDVEEGEIVVSGDSHVDHLDHQQ
SGSSNHDRDEGEDEQVLQPKIKRKRSLRVRPRHTIERPEEKSGSETPSLQRGDSSLLPFH
VDHKSQAQSRADSEIKTYGEPHAVKHDQSDSSSKTRRILPRRGSNMSKVHVSPKSGRSNG
MSDPAEDAAEPHRENWDGKVGNTSGTSVYGTKMSEIVQRKCKNVISKFQRRIDKEGPQIV
PLLTDLWKRIENSSYASGSGNNLLDLRKIDQRIERLEYAGVMELVSDVQSMLKNGMQFYG
FNYEVRTEARKVHDLFFDILKIAFAETDFREARSALSFTSPVLTSNAPSPRAATVGLSKR
HKLINEVEPDSTPQQKPQQRAPIFNGEDTRVRSHMLQKESRLGSGSGNSRDHYHQDDSPP
LAHPGDLVICKKKRKDREKSVVKTRTGSAGPVSPPSVGRSIRSPGPNSVPKQNPHSQGWA
NQPGQPTNKGGGSVGWANPVKRLRTDSGKRRPSHL
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggtggcggagggggaggcgggcccggccggggagtgggccctgctggccgt
gccggatcgacgtcatcggctgcttcgccatcttcatcgtcctcggccgtgtccacgccg
caactgggttttgattcggtgcagcatcaacaacatcagcagcagcaacaacagcagcag
cagcaattggggtctagacagccattacaccaacaacaatttttaagaaaacctgaaggg
aatgaagctcttttagcatatcaagctgctggtctgcaaggagttttgggagggggcggc
tccagtcaaatgcctcaacaatctaggaagttcattgatttggctcaacaacatggctcc
caggatggacagagtcgtagtcaaggtgttgaccagcaagcggtaaatccagttcatcaa
gcatatcttcagtatgcttttcaggctgcccagcagaagtcaggtttgacaatgcaacct
cagcagcaagctaaaatgggattgttggggccgccatctggaaaggatcaggacatgcga
ttgggaaatatgaaaatgcaggaagtcatgtctaatcaggcacctagtcaggcactagca
tcatcttctaagaatttgacggaacactttattcgtggagaaaagcaggttggccaagga
cagccatcagtctctgaccaaaggagtgactcgaagccttcagcccaaccatcaggcatg
ggtcaattcatgcccggaaacatgttaaggccaatgttggcaccacagtctcagccaagt
ggccaaaccatgccaaataaccagattgcgttggttaatcagttgcaagcatttgcactt
gagcacaacattgatctttcacagcctggaaatgcaaacttaatgtcacagctcattcca
ctgttgcagtcgaggatttctgctcaacaaaaagctaatgaaagcaacattggggcacaa
tcctcacctgttccagtgtcaaagcaacaggttacttctcctccagtagcaattgagagt
tctcctcgtgctaatacatcaagtgatgtatctggacagtctagctctgcaaaagcaaag
cagacagttgcggctaacccgtttggttcaggttcaaatagtagcatatttaacaatagt
aacggccctatgcagcagttttctgttcatggcagagaaaaccagatgccacctaggcag
tcaaatcctattggaaatggaatgacttctacctatcccacagtgtcatccgcaaacaca
agccagggggtggatcactcttttcatgtaaaaaattcacaaaacaatccagaaactttg
cagatgcaataccatcgacagttgagtggatcttctccacaagctgtagttcctaatgat
ggggtttctggcaacaagagccagtcacaaggtggactggctactcagatgggacagcaa
cgccatgggttcactaaacagcagctgcatgttcttaaagcacaaatactagcatttagg
cgactcaagaaaggtgaaggcacactccctcaagaacttctacgggctattgctccacca
cctcttgagatgcagccacagcagcaattgcttcctggaggaggaaatattcatgataaa
tcttctgggaaaactttagaagatcatgtgcgtcatatggagtccaatgagaaagattca
caggctgtggcatcaatgaatgcacagaacggtgcaaaagaggaagcttttgccggagaa
gagaaagcaattgtatcaacagtccatgtgcaaggagcgctcgctgtggtgaaggaacct
actcctttggtgtcttctggaaaagaagagcagcattcgactttatcttctgtaaagtca
gaccatgaagttgaacgtggtattcaaaaagcttctgctagaagtgagattaaagttgat
agggggaagtctgttgcatcacaggtcacacaggtcgctgtatctgatgtcatgcaagtt
aaaaagcctgcacaagcaagcactgtaccactgccaaaagatgttagctctgctagaaag
tatcatggacctctttttgatttcccctttttcactaggaaacatgactctttaggttca
ggggtgatggtaaacaataacaacaacaacaacaataatctaacattggcatatgacgtc
aaagatcttgtttttgaggaaggtgtggaagttcttaacaagaagaggacagaaaatatc
aagaagattggtggtcttttggcagtaaatttggaaaggaaacggattaggcccgatctt
gtcttgcggttgcaaattgaagaaaaaaagcttcgactttcagatttacaggcacgctta
agagatgaaattgatcaacatcagcaggagataatggcaatgcctgataggccttatcgg
aagtttgttcggctttgcgaacgtcagcggatggagctgtctaggcaagtgcaggcctct
cagaaagcaatgagagagaagcaactgaaatctattttccaatggcgtaagaagcttcta
gaagctcactgggccattcgcgatgcacggactgcacgtaacaggggagttgccaaatat
catgagagaatgttgagggaattttcgaagagaaaggatgatcataggaataaaaggatg
gaagcactgaagaataatgatgttgaaaggtacagggaaatgttgctggaacagcagact
agtatcccaggggatgcagcagagagatatgctgttttatcatctttcctgagtcagact
gaggaatatcttcataaacttggaagtaaaataacagcagctaagaatcagcaagaagtg
gaagaggcagcaaatgctgctgcagctgctgcacgtttacagggtctctcagaggaagaa
gttaggacggcagcggcttgtgctggagaggaagtaatgattagaaatcgatttattgag
atgaatgcacctagagacagttcatctgttaacaagtattatagtcttgcacatgctgtg
aatgaaagggtcataaggcaaccctcgatgttacggactggaaacttaagagactatcaa
cttgttgggttgcaatggatgctttctctgtataacaacaaattaaatggaatattagca
gatgaaatgggtcttgggaaaacagtacaggtaatggcattgattgcatatttaatggag
ttcaaagggaactatgggccgcatctcataattgttccaaatgctgtcttggtaaattgg
aagagtgagttgcatacttggcttccatccgtgtcatgcatttattatgttggtgggaag
gatcaacgggcaaaattgttttctcaagaggtttgtgccttgaagtttaatgtcctcgtg
acaacttatgagttcattatgtatgatcggtctaaactctcaaaaattgattggaagtat
ataataattgatgaagcacaaaggatgaaagacagggaatcggttctagcacgtgatctt
gataggtatcgttgccaaaggcgcttgcttttgacaggaacaccattgcagaatgattta
aaggaactctggtcacttttaaatctgcttcttccagaagtatttgataatcggaaagca
tttcatgactggttttcaaaaccctttcaaaaggaagcccctacaccaaatgcagaagat
gactggcttgaaactgaaaagaaagttatcatcattcaccgacttcatcaaattttagag
ccttttatgcttaggcggcgtgttgaagatgtggaaggtgcactcccatctaagatctcc
atcgttttgaggtgtagaatgtcagccattcaaagtgctgtatatgactggatcaaatca
acaggcactattcgagtggatcctgaagaagagaagctaaggattcaaaaaaatccacaa
taccagcccaaagtgtacaaaacattaaataatagatgtatggaactgcgaaaaacttgc
aatcatccgctgctcaattacccgttcttcaatgatttttccaaggattttcttgtaaga
tcctgtgggaaattatggatcctggacaggatccttgttaaacttcaaaaaacagggcat
cgagtacttcttttcagtaccatgacaaaactccttgatattttggaagaatacttgcag
tggcgtcatcttgtcttcagaaggattgatggaacaaccagtttagaagaccgtgagtca
gctatagtggatttcaacagacctggttcagactgctttatcttcttacttagtattcgt
gctgcgggtcggggtcttaatctccagtctgctgatacagttgtcatatatgatcctgat
ccaaaccctaaaaatgaagagcaggcagttgctagagcccatcgcattggacagaagaga
gaggtcaaggtcatctatttggaagcagttgttgacaaaatggctagccatcagaaagag
gatgaactacgaagtggaggtacagttgattcagaggatgaccttgctggtaaggaccgg
tatatcggatcaattgagagcctcataagaaacaatattcaacagtacaagattgacatg
gctgatgaggttatcaatgctgggcgttttgaccagagaacaactcatgaagagagacgt
atgactctggaaaccttactgcatgatgaagaaaggtaccaagaaactcttcatgatgtt
ccctcattacaggaggtaaatcgcaggattgctagaagtgaagaagaagttgaattgttt
gatcagatggacgaagaacttgactggattgaagaaatgacaaggtacaaccagctcccc
aaatggcttcgaaccagtacaaacgaagtaaacgctgtgattgccagtttatcaaaaaga
ccatctaagaccactttgttgggtggcaatgctggtttggagtccactgaaatgggctct
ggttcatctccgaaaactgaaagaaagagggggcggcccaagaaaaatcatcctagctac
aaggagttagatgatgacaatggcgaatactttgaagcaagttctgatgagaatgaagaa
gagggagaagttgaagagttagaggatgatgaatatagtggtgctgttgaggcaacacca
attattaaggaacaagtggaagaggatgtccttgaatgtgatggtggatacgaatatccc
aaggattcagaaagagttagaaacaaccacatactagaagaagctgggtcctcaggatca
tcctcagacagtcggagattgatgcagacagtgtctcccgtttcttctcagaaatttggg
tccctgtctgccttagatggtaggccgggatctacttcaaagaggatgcaagatgatgta
gaggaaggtgagattgtcgtatcgggtgattctcatgtggaccatttggaccaccaacaa
tctggaagttcgaatcatgaccgtgatgaaggtgaagatgaacaggttttgcaacccaag
atcaagaggaagcgtagccttcgggttcgccctcgtcataccatagagaggccagaggag
aagtctggtagtgagacgccatctcttcaacggggagattcatctctgttgccatttcat
gtggaccataaatctcaagcacagtcaagggctgattctgaaatcaaaacatatggagag
ccccatgctgtaaagcacgaccaaagtgattcatcttcaaaaactaggcgaattttgcct
aggagaggctctaatatgtccaaagtgcatgtttcacctaaatctggcagatcaaatggc
atgtctgatcctgcggaagatgctgctgaaccccacagagaaaattgggatggaaaagtt
gggaatactagtggaacttctgtttatggcacaaaaatgtctgagatcgtccagagaaag
tgcaagaatgtaattagcaagttccaaaggagaatagacaaggaaggtcctcagatagta
cctttactaacagatttgtggaagcgcattgaaaattctagttacgcaagtggatctgga
aataatctcttggatttacgaaagattgatcagcggatagagaggttggagtatgctgga
gtaatggagcttgtgtccgatgtgcagtctatgttgaaaaatggaatgcagttttatggg
tttaactatgaggtaagaactgaagccaggaaagtacatgatcttttctttgatatcttg
aaaatagcttttgcggagactgattttcgagaagccagaagtgcactctcatttactagc
ccagttttaaccagcaatgctccgtcccctagggcggcaactgttggcctaagcaagaga
cacaaactgataaatgaggtggagcctgactcaaccccccaacagaagccacaacaacgt
gcaccaattttcaacggcgaagacacaagggtgcgaagccatatgctccagaaggaatca
agacttgggagtggaagtggtaacagtcgggaccactatcaccaggatgattctccaccg
cttgctcatccaggggatctggttatctgcaagaaaaagagaaaagacagggagaagtcc
gtggtgaagaccaggactggatctgctggccctgtttcacccccaagcgtgggtcgcagt
attagaagtccaggtccaaattcagttccaaaacagaacccccattcgcaagggtgggct
aaccagcctggtcagccgacgaacaagggtggagggtcggtcggttgggccaatcccgtg
aagaggttaaggacagattctggaaagagacgcccgagccatttatga
DBGET
integrated database retrieval system
