Pyrus x bretschneideri (Chinese white pear): 103940929
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Entry
103940929 CDS
T03446
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103940929
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pxb01007
]
103940929
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxb03016
]
103940929
Enzymes [BR:
pxb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
103940929
Amino acid related enzymes [BR:
pxb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103940929
Transfer RNA biogenesis [BR:
pxb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103940929
Prokaryotic type
103940929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
eIF3_N
Occludin_ELL
YabA
DUF3450
Motif
Other DBs
NCBI-GeneID:
103940929
NCBI-ProteinID:
XP_009349383
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MLDINLFREEKGHNPEIIRESQRRRFKGVEIVDEVIQLDKEWRQRQFELESIRKEFNKIN
KRVAQLRIAGEDATEVIKDTEENKRLAAEKEVEVREALTQLNSKLEIIGNLVHDSVPFSN
DEENNAVIRSWGDKRVEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQAL
INFGLDFLEERGYTELHTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATSEQPL
CAYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITTPNGND
SWEMHEEMIKNSEEFYQALGLPYRIVSIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS
NCTDYQSRKLEIRYGQKKGNEQTKQYVHLLNSTLTATERTMCCILENYQTEEGVNVPKVL
QPFMGGKEFLPFKEKPVPEVKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctggacatcaatctgttcagagaggagaagggccacaaccccgaaataatccgggaa
tctcaacggcgacgtttcaaaggcgtcgagatcgtcgacgaggtcatccagctcgacaaa
gaatggcgccagcgtcaattcgagcttgagagcattcggaaagagttcaacaagatcaac
aagcgagttgctcagctgaggattgcaggagaggatgcaactgaggtgattaaggacaca
gaggaaaataaaaggttggcagcagagaaagaagttgaagtgcgagaagctttaacacag
ttgaattcaaaactggaaatcattggaaaccttgtgcatgattcggttccctttagcaat
gatgaggaaaataatgctgtgattagatcatggggtgacaaacgagtggagccaaaactc
aaaaatcatgttgaacttgttgagcttcttgggattgcagacttgaagaaaggcgctgaa
gtggcaggaggtagaggtttttacctgaagggtgctggtgtacgccttaatcaagctctg
ataaactttggtcttgattttcttgaggaaaggggatatacagaactgcataccccattt
ttcatgagaaaagatatcatgggaaagtgtgctcaattagcacaatttgatgaggaactt
tacaaggttaccggtgaaggtgatgacaaatatctgattgctacatctgaacagccactt
tgtgcatatcatatagacgattggatccatccatcccagttacccttaagatatgcggga
tattcatcttgttttcgtaaagaagctggttcacacggtcgagataccttgggaattttt
agggtccatcagtttgagaaagttgaacagttctgtattacaaccccaaatggcaatgac
tcttgggaaatgcacgaggaaatgataaaaaactctgaggaattttatcaagcgttaggg
ctcccctatcgtattgtgtccatcgtttctggtgctttgaatgatgccgcagcaaagaag
tatgatctggaaggatggtttcctgcgtctcagacatatagagagctggtttcttgttca
aactgtacggactaccagtcaagaaagttagaaattcgatatgggcagaaaaagggcaac
gagcagacaaagcaatatgttcacttattgaactcaactcttactgcgacagagagaacc
atgtgctgcattctcgagaactaccagaccgaagagggtgtaaatgtaccaaaagttctt
caacctttcatgggtggaaaggagttcctaccgttcaaggagaaaccggtccctgaagtc
aaagggaagaaatcgaaggcctaa
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