Pyrus x bretschneideri (Chinese white pear): 103940996
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Entry
103940996 CDS
T03446
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxb03016
]
103940996
Enzymes [BR:
pxb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
103940996
Transfer RNA biogenesis [BR:
pxb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
103940996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
Pch2_N
Motif
Other DBs
NCBI-GeneID:
103940996
NCBI-ProteinID:
XP_009349453
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MAVGATVGSCSIFRSASSSASSPTLLPFRCCPCHFTTLQFRRLSKLGIRFPIFRSGKLAP
GHGGGVQSTSVHSLVDSVMEELGALRRRRLVPAAAKVELTSSGGIVEDKLVSRTLQQGLL
LEFKKDAERVLLAVAQKPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHTEISEFI
QKAQASSDPALLEFAWVELLEKNKRVTAEELAEMIFGSVEPLECYCAHLLLSEDEVYFTV
LETKGSRSIYGPRPAVQVEELLRRKLAKEAAEKELQEFKQLLKSAKAMPLNAKPPKYSWL
AEEKIRHKIESLEAYAIDACTNDDQRKTAGTILRTMGMVKTASSALNLLIDIGYFPVHMN
LDLLKLNIRTDHSDEVIAAAEHLLSDSSDLDVIERRDLTHLKVYAIDVDEADELDDALSA
TRLQDGRIKIWIHVADATKFVQPGSIIDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQ
QGEICNAVTVSVVLHSDGSIAEYSVDNSIIKPTYMLTYESASELLHLNLQEEAELKILSE
AATLRSIWRREQGAIDTATLEARIKVVNPEDPEPVINLYVENQADPAMRLVTEMMVLCGE
VIATFGSRNNIPLPYRGQPQSNIDTSVYAHLPEGPVRSSALVKLMRAAEIDFRKPIRHGI
LGLPGYVQFTSPIRRYMDLLAHYQVKAFLAGESLPFSAGQLEGMASIVNMNVRVARRLFS
SSLRYWILEYLRRQPKEKKYHALILRFIKDRIAAILLVEVGLQSSVWVSVGAQIGDEVLV
RIEEAHPRDDVLLLKEVVI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggagccactgtgggcagctgctcaatcttccgctccgcctcctcttccgct
tcctcccccactctccttcctttccgctgctgcccttgccatttcactactctccagttc
cgccgactctccaaattaggcattcgcttcccgatatttcggtccggtaagctagctccc
ggccatggcggcggcgttcaaagcacctccgtccacagcctcgtcgatagcgtcatggaa
gagctcggcgccctgcgcagacggagactagttcccgctgccgccaaggtggagctgaca
agtagtggtgggattgtagaagataagcttgtgagccggacgctgcagcaagggttgctg
cttgaattcaagaaggatgcagagagagtgttgctggccgttgcgcagaagcccgatggc
aagaagaactggatggtgtccgatcagaatggtgttacatcatcgattaaaccacaacag
attacatatattgttcccggtgttgagaattttgaccacacagagatatcagaatttatt
cagaaagctcaagctagctcggatccagcactgcttgaatttgcttgggttgagctcctt
gaaaagaataagcgggtgacggcagaagaattagctgagatgatatttggtagtgtggag
cctcttgaatgctactgtgctcatctgttgctttcagaagacgaagtatacttcactgtt
ctggagacaaaaggttctcgctctatatatggacctcgacctgctgtacaggttgaggaa
cttctgcgtaggaagctcgcaaaggaggctgctgagaaagaactgcaggagtttaaacaa
ttactgaaatctgctaaggcaatgcctttaaatgctaaacctcccaaatattcttggttg
gctgaagagaaaatcagacacaaaattgagtctcttgaagcttatgctattgatgcctgc
acaaatgatgaccaaaggaaaacagccggaacaatcctaagaacaatggggatggtaaaa
acagcctcatcagctttgaatctcctcatagacattgggtattttcctgtacacatgaat
cttgacctgttgaagttgaacatccgtactgatcattcagatgaagttatagcagctgca
gaacatcttctgtcagattcatctgatttagatgtgattgaaaggagagatctcactcac
ttgaaggtctatgctattgatgtggacgaggctgatgagctcgatgatgccctgagtgca
acgaggctacaagatggacgcattaaaatatggattcatgttgcagatgcaactaagttt
gtccaacctgggagcataatagacagggaggcaatgagaagaggaacttctgtattcttg
cccactgctacttatcctatgttcccggagaaacttgccatggagggaatgagtttgcaa
caaggagagatttgcaatgcagttactgtatctgtggtgctgcactccgatggaagtatt
gcagaatattcagtggacaactcaatcattaaaccaacatacatgttaacatatgagagt
gcatctgagcttcttcatttgaacctgcaagaagaggctgaactgaaaatcctgtctgag
gctgcaactctccggtcaatatggagacgagaacagggcgcaattgacacagccacattg
gaagcacgcatcaaagtggtaaatccagaggatccggagcctgttattaatttgtatgta
gaaaaccaggcagaccctgcaatgcgacttgtcactgagatgatggtactctgcggagaa
gttatagccacttttggttctagaaataacattcctttaccctacagaggacaaccccag
tccaacatcgacacctctgtatatgcacatcttccagaaggacctgttagaagctctgct
cttgttaaactaatgcgtgctgctgaaattgatttcagaaaacctatacgtcatggaatt
ttaggacttccgggttatgttcagtttacatctcccatccgtagatatatggatctacta
gctcactatcaggtgaaagcatttctcgcaggggaatctcttcctttctcggctggtcag
ttggaggggatggcatctattgtgaacatgaatgttagagtagcaaggaggctctttagc
agcagtcttcgctactggatattagaatatctgagaaggcagccaaaagaaaaaaaatat
catgcgctgattcttagattcattaaggatcggattgcagccatattgttagttgaggtg
ggacttcaatcttccgtgtgggtatccgtgggagcccaaattggagatgaagttcttgtt
cggatagaagaagctcatccacgggatgatgtgcttttacttaaagaggtggtcatttga
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